Kroppenstedtia eburnea: GXN75_16975
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Entry
GXN75_16975 CDS
T06618
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
keb
Kroppenstedtia eburnea
Pathway
keb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
keb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXN75_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
keb03021
]
GXN75_16975
03019 Messenger RNA biogenesis [BR:
keb03019
]
GXN75_16975
Transcription machinery [BR:
keb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GXN75_16975
Messenger RNA biogenesis [BR:
keb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GXN75_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
AAA_25
NACHT
Mor
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
QKI83534
LinkDB
All DBs
Position
complement(3468871..3470133)
Genome browser
AA seq
420 aa
AA seq
DB search
MDLSLNNLENRRLTELYKLAREYQISNYSQMKKKELIFAILKAKAEKAGLMFMEGVLEMM
PEGYGFLRPINYLPSSEDIYISASQIRRFDLRTGDLVSGKVRAPKENERYFGLLQVEAVN
GEDPEQAAERLHFPALTPLYPQKRLRLESQPDKLSTRIMDLVAPVGLGQRGLIVAQPKAG
KTMLLKEIANSITANHPGVSLFVLLIDERPEEVTDMQRSVDGEVVSSTFDEMPENHIKVA
ELVLERAKRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNLELHLDRRLSERRIFPAIDLRRS
GTRREELLLSKTEQEKLWALRKTMSEGLEFTDSFLRKLAETETNEEFLAKLESRPRSSTA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatctttccttaaacaatctggagaatcggcggttgacggaactgtataaactggcc
agggagtatcaaatctccaactacagtcagatgaaaaagaaagaactgatttttgcaatc
ctgaaagccaaggcggaaaaagcgggtttgatgtttatggaaggggtgctggagatgatg
ccggagggatacgggttcctccgccccatcaactatctcccttcctcggaagacatctac
atctccgcctcgcaaatccgtcgctttgatctccgtaccggggatctggtatccggaaaa
gtgagggccccgaaagagaatgagcggtactttggcctgttgcaagtggaagccgtcaat
ggcgaagatccggaacaggctgcagaacgtcttcatttccccgccttgacccccctgtat
ccccaaaaaaggcttcgtctggaatcgcaaccggataagttatccacccgaatcatggac
ttggtcgcgccggttgggctgggacaacgcgggctgatcgttgcccagccaaaggccggg
aagacgatgctgctcaaggagattgccaacagcatcacggccaatcaccccggggtttcc
ctgtttgttctcctgatcgacgagcggccggaagaagtgacagatatgcaacgctcggtc
gatggggaggtggtcagctccacttttgacgaaatgcccgagaatcatatcaaagtggcg
gagttggtcctggagcgggccaagcggttggttgaacacaaacgggacgtggtgattctg
atggacagcatcacgcgactggcccgggcgtacaacctggtgatcccgcccagtggccgc
accttgtccggagggattgacccggctgccttccaccggcccaaacggtttttcggttcc
gcccgaaatgtggaagagggcggcagtttgaccattttagccacagccctcgtcgatacg
ggctcccggatggatgatgtgatctatgaggaatttaaagggaccggcaatctggaactt
catctggatcgccgtctgtccgaacgacggatctttccggccatcgacctccgccgctcc
ggcacccgcagagaggaacttctcctctccaagacggaacaggagaaattgtgggccctg
cgcaaaaccatgtccgaggggctggaattcaccgattcttttctgcgcaagctggccgaa
acggagaccaatgaggagttcctcgccaaactggaatcccgtccccggtcatccaccgca
taa
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