Kwoniella dendrophila: 91093293
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Entry
91093293 CDS
T11323
Symbol
L201_002621
Name
(RefSeq) endoribonuclease YSH1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
kep Kwoniella dendrophila
Pathway
kep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91093293 (L201_002621)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kep03021
]
91093293 (L201_002621)
03019 Messenger RNA biogenesis [BR:
kep03019
]
91093293 (L201_002621)
Transcription machinery [BR:
kep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91093293 (L201_002621)
Messenger RNA biogenesis [BR:
kep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
91093293 (L201_002621)
U7-dependent histone pre-mRNA processing factors
91093293 (L201_002621)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
91093293
NCBI-ProteinID:
XP_066074492
UniProt:
A0AAX4JSK7
LinkDB
All DBs
Position
3:join(838595..838902,838983..839028,839093..839184,839238..839575,839654..840096,840190..840486,840555..840809,840882..841023,841102..841361,841428..841571)
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AA seq
774 aa
AA seq
DB search
MNRGGRRQFRPHHGHGGHGHTGYGQQQQQQPVQVISPAGDDEPLTITMLGAGQEVGRSCC
VIEHRGKKIVCDAGLHPAHPGLGSLPFIDEVDWSTVDAILVTHFHVDHAAALPYIMEKTN
FKDGNGKVYMTHATKAIYGLTMMDTVRINDQNPDVSGKLYDESDVQSSWQSTIAVDYHQD
IIISGGLRFTPYHAGHVLGASMFMIEIAGLKILYTGDYSREEDRHLVIAEIPPIKPDVLI
CESTFGVHTLPDRKEKEEQFTTLVSNIVKRGGKCLMPIPSFGNGQELALLLDEYWNEHVE
LQNIPVYFASGLFQRGMRVYKTYVHTMNQNIRSRFARRDNPFDFKFVKWLKDPKKLLLND
HQKSGPCVVMASAQFMSFGLSRELLEEWSSDSKNGVIVTGYSIEGTMARTLLSEPDHIES
LKGGNIPRRLTVKEISFGAHVDYAQNSKFIQEIGAQHIVLVHGEASQMGRLRAALRDTYA
TRGQEINIHTPRNCEPLVLTFRQERVVKAIGSLAADRPVHGSPLKGLLVSKDFSYTLLDP
KDLKDFTGLSTSTLIQKQSIPIGVDWSVIRWHLEGMYGEVEDGVDEEGRAILIIMNAIKV
VQISEIVVEIQWSSNSSNDMIADSALAVLLGIDGSPATVKLTSIPHQHAHHDHRHSHSHS
EELTNGNSINGNISGNEEFDKIKMFLEAHFGQVSGPNISVQEGDEDELMVMTVTIDDIVA
KLDLISMRVESDSPDLKRRVETVLEMALTTLKPLSRSFIGSGVDMSLENVAVAA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtggaggtagaagacaattcagaccacatcatggacatggcggtcatggacac
actggatatggacaacaacagcaacaacaacctgttcaagtcatctcacccgcaggcgat
gatgaaccactaacaataacgatgttaggtgcaggtcaagaagtgggtagatcatgttgt
gtaattgaacatagaggtaaaaagatagtttgtgacgcaggtctgcatcctgcacatcct
ggtttaggtagtttaccttttattgatgaagttgattggtcaactgttgatgctattttg
gtgactcactttcatgtggatcatgcggctgctttaccgtatataatggagaagaccaat
ttcaaagatggaaatggaaaagtatatatgacacatgctactaaagcaatttacggatta
acaatgatggatactgttaggataaacgatcaaaatccagatgtttcaggtaaattatac
gatgaatcagatgtacaatcatcatggcaatcaacaattgcagtagattatcatcaagat
ataataatttctggtggattaagatttacaccatatcatgctggacatgttttaggtgca
tcaatgtttatgattgaaattgctggattaaagatattatatacaggtgattattcaaga
gaagaagatagacatttagttattgctgagattccaccaataaaacctgatgttttaatt
tgtgaatctacttttggtgtacatactttacctgatagaaaagaaaaggaagagcagttc
acaacccttgtatcaaatatcgtcaaacgtggtggaaaatgtttaatgccaataccatca
tttggaaatggacaagaattagctttattattagatgaatattggaatgaacatgttgaa
ttacaaaatatacctgtatattttgcttcaggattatttcaacgtggaatgagagtttat
aaaacttatgtacatacaatgaatcaaaatattagatcaaggtttgcaagaagagataat
ccttttgattttaaatttgttaaatggttaaaagatccaaaaaaattgttattaaatgat
catcaaaaaagtggtccttgtgttgttatggcttcagcacaatttatgtcatttggttta
tcaagagaattattagaagaatggtcaagtgattcaaaaaatggtgttatagtgactggt
tattctattgaaggtactatggcaaggaccctgttatcagaaccagatcatatagagtcg
ttaaaaggcggcaacatacctagaaggttgacagtgaaagaaatatcttttggtgcacat
gtagattatgcacaaaattcaaaattcatacaagaaatcggagcacaacatatcgtactt
gttcatggtgaagcttcacagatgggtagactgagagcagctttgagagatacgtacgct
accagaggtcaagaaatcaatatacatacacctagaaattgtgaacctttggtattaaca
tttagacaggaaagagttgttaaagcaatcggatcattagctgcagatcgacctgtacat
ggtagtccattaaaaggattactggtatcgaaagatttctcttacactttactggaccca
aaagatctaaaagattttactggtttatcgacaagtacgttaatacagaaacagtctata
ccgataggtgtagattggagtgtgataagatggcatctagaagggatgtatggggaagtt
gaagatggtgtagatgaggaagggagagctattctcattatcatgaacgcaatcaaggtt
gtacagatatcggagatagttgttgagatacagtggtcttcaaattcaagtaatgacatg
atagcagattccgctttagcagtactgctaggtatagatggtagtccagctacagtcaaa
ctcacatcaataccccatcaacacgcccatcacgatcatcgccattcccattcccattcg
gaagaattgactaatggtaattcgatcaatggtaatatcagtggaaatgaagaatttgac
aagataaaaatgttcttggaagctcatttcggtcaagtttctgggccaaatatcagtgta
caagaaggagatgaagatgaattaatggttatgactgttacgatagatgatattgttgct
aaacttgatttaatttcgatgcgtgtggaatcagattcaccagacttgaaaagaagagtt
gaaactgttttggaaatggctttgacaactttaaaacctttatcaagatcattcattggt
tcaggtgtagatatgagtttagaaaatgtcgcagtggcagcataa
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integrated database retrieval system
