Kwoniella dendrophila: 91095140
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Entry
91095140 CDS
T11323
Symbol
L201_004470
Name
(RefSeq) uncharacterized protein
KO
K03679
exosome complex component RRP4
Organism
kep Kwoniella dendrophila
Pathway
kep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91095140 (L201_004470)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kep03019
]
91095140 (L201_004470)
Messenger RNA biogenesis [BR:
kep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
91095140 (L201_004470)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
91095140 (L201_004470)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
91095140
NCBI-ProteinID:
XP_066076309
UniProt:
A0AAX4JVU0
LinkDB
All DBs
Position
5:complement(join(1731210..1731422,1731558..1731770,1731867..1731944,1732041..1732233,1732344..1732445,1732519..1732709))
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AA seq
329 aa
AA seq
DB search
MFSVKTIPPESTQSFSDDIPSTHRKHQAELDAMDLDEDEFGAGPSKRNIVTPGEVITSSK
EYMRGHGTYVEETNVVSSVTGTIERVNKLISVKPVRSKYVPEVGDLVIGRIVDVGAQRWR
VDANGRQDAVLMLSSVNLPGGVQRRKIESDALKMREFLAEGDLLVAEVQAFFGDGAMSLH
TRSLKYGKLRNGQLLTVPAQLIRRLKSHFHHIPPPCGPTGVDVILGLNGYIWVSNGTSQE
KREGGEGFDSEGVYSDKNDDISPEGRQAISSISNLIKLLAQEGIPLTDTLIEECYNWIIN
QNQIPSGPLSQEDQERMLAEIVGIDVTAY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagtgaaaactataccgccagaatcaactcaatcattttctgatgatatacct
tcaactcatcgaaaacatcaagctgaattagatgctatggatttagatgaagatgaattt
ggtgctggaccaagtaaaagaaatatagttactccaggagaagtgattacttcctcgaaa
gaatatatgaggggtcatggtacatatgttgaagaaacgaatgtagtatcgagtgtgact
ggaacaatagaaagagtgaataaattaatatctgttaaacctgttaggtcaaaatatgta
cctgaagtaggtgatttagtaattggacgaatagtcgatgttggtgcacaacgttggaga
gtagacgcaaatggaagacaagatgctgtattaatgttatcatctgttaatttacctggt
ggtgtacaaagaagaaaaattgaaagtgatgctttgaaaatgagagaatttttagctgaa
ggtgatcttttagtagctgaagttcaagctttctttggtgatggtgcaatgtcattacat
actagatcattaaaatatggtaaactacgtaatggtcaactattgacagtcccagcacaa
ttgattagacgattaaaatcgcattttcatcatataccacccccgtgtggacctacaggc
gttgatgttatattaggcttgaatggttatatttgggtatcaaatggtacatcacaagaa
aaaagagaaggtggtgaaggttttgattctgaaggtgtttatagtgataaaaatgatgat
atttcacctgaaggtagacaagcaatatcatcgatatcgaatttaatcaaattattagcc
caagaaggtatacctttaacagatactctaattgaagaatgttataattggataatcaat
caaaatcaaataccatccggtccattaagtcaagaagatcaagaaaggatgttagctgaa
attgttggtattgatgtaaccgcttattaa
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