KEGG   Kwoniella dendrophila: 91097156
Entry
91097156          CDS       T11323                                 
Symbol
L201_006487
Name
(RefSeq) uncharacterized protein
  KO
K12599  antiviral helicase SKI2 [EC:5.6.2.6]
Organism
kep  Kwoniella dendrophila
Pathway
kep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    91097156 (L201_006487)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kep03019]
    91097156 (L201_006487)
Enzymes [BR:kep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     91097156 (L201_006487)
Messenger RNA biogenesis [BR:kep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     91097156 (L201_006487)
  mRNA degradation factors
   3'-5' decay
    Ski complex
     91097156 (L201_006487)
SSDB
Motif
Pfam: DSHCT DEAD Ski2_N MTR4_beta-barrel MTR4-like_stalk ResIII Helicase_C DEXQc_Suv3 Helicase_dom4_arc HTH_Tnp_ISL3
Other DBs
NCBI-GeneID: 91097156
NCBI-ProteinID: XP_066078303
UniProt: A0AAX4K1E0
LinkDB
Position
9:join(149741..149964,150060..150412,150503..150699,150757..150852,150910..150942,151000..151145,151212..151344,151407..151511,151568..151674,151747..152363,152423..152518,152572..152639,152720..153082,153182..153367,153427..153556,153612..153742,153806..154033,154108..154575,154698..154866,154944..155017)
AA seq 1307 aa
MAVEEDQSLVDAAFLELLQTAANPKSNGALSSDDLAASLGLDGPISKSRALEILEKEVLA
PVENLSGDELWRWQVQPPVELPIPPLTLKPLHQTHTVTPSFKGIDGEFTHWREGLAPKPP
AHPTLSSSTTRAPGNLQNFVRGKGNYVPFLPGGLETAAKPEEEEGEEENQDDEEDGWKTR
APGLRRGVKLEGADEFLAEMLGQQSIAPKAKRRRKEGEFEDQLTISRVGDEDAEIEEMSA
NGHTGLNSKNVDDLLPIGRLPAPPPPRRQFKAAVHKEWAHVVDVNQRLTNFHELVPEMAR
EYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKAL
SNQKFRDFKQTFDPSTVGILTGDVQINAEGSCLIMTTEILRSMLYKGADLIRDVEFVIFD
EVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKKKDIYVISTPMR
PVPLEHFLWAGKDIHKIVDSKSRFIGDGYKSAQEATRRKQDKEREANGLPPVQQTGGRGG
APTKARDLPTGKNAPFTNIGAGRTHTNRGGGNGAPAPAVPARGGGGAGRGGGRGGRGGFG
GRASHQLDQNVWTHLIEYLKKNTLLPVVNFVFSKKRCEEYAETLQSKDLNTAKEKSEVHL
TWERALTRLKGSDKTLPQILRMRDLLSRGIGVHHGGLLPLVKEVVELLFSRGLVKVLFAT
ETFAMGVNMPAKCVVFSGIRKHDGTSFRNLLPGEYTQMAGRAGRRGLDTTGTVILLSGDE
LPTVTELNEMMLGTPNRLSSQFRLTYNMILNLLRVEALKVEEMIKRSFSENATQKMAPEQ
QRQIAHAEKQLARLPNVECEVCKPDIDAFYQLSSEIVRVNQSIFKQASYAQNASKIFVSG
RVVILRNGHLPGNLAILLRSATNIMTDGVKSDAKAFRMLVLVTPGQRSRKEDVKESDVPP
RYPPVLPKGSFPNPQWEIAIYDTTSFSFVTGQILKVDHTAIVDKSSKQARDDALHNLTLL
HEELSSLPELPEVDWSRIRSVEFVDAIRQRAILNDRLSKLGCQLCEDFQDHYATLHERKV
VESGLISLKLALSDQNLELLPDYNSRVEVLKKLSFIDENSTVLLKGRVACEINSAPELIL
TELILENILSEYEPEEVVALLSIFVFVEKSDSQPIIPEKIQNGLEVIYKIANEIEVQQDK
CSIQYDQFQEKYKTGLVEVVYEWAKGMPFNQITELTDIPEGTIVRVITRLDETCREVRDA
ARVIGDAELFQKMEAAQALIKRDIVFAASLVSLYVSSSKQKQTLPVA
NT seq 3924 nt   +upstreamnt  +downstreamnt
atggcagtggaagaagatcaatcattggtggacgcagcgttcctagagctacttcaaaca
gctgctaatccaaagtcgaatggtgcactttcaagtgatgatctcgcggcatctttaggt
cttgatggtccgattagtaaatcaagagctttggaaatactggagaaggaagtcttagct
cctgtggagaatctgagtggagatgagttatggagatggcaagttcaaccgccagtggaa
ttacctataccaccattgactttaaaaccattacatcaaacacatacagttacaccatct
ttcaaaggcatagatggtgaatttacacactggagggaaggtttagcacctaaaccacct
gcacatccaaccctatcatcatcaacaacaagagcacctggaaatttgcaaaatttcgtt
agaggtaaaggaaattatgtaccattcttacctggtggattagagactgctgctaaacct
gaagaagaagaaggggaagaggaaaatcaagatgatgaagaagatggatggaaaactaga
gctccaggtttaagaagaggtgtcaaattagaaggcgccgatgaatttttggctgaaatg
ttaggtcaacagagtatagcacctaaagctaaacgaaggaggaaagaaggtgaattcgag
gatcaattaactatctcaagagtaggagacgaagatgcggaaattgaagaaatgagtgca
aatgggcatactggtctaaatagtaagaacgtggatgacttgttacctatcggacgactt
cctgctcctcctccaccgcgaagacagttcaaagctgctgtacacaaagaatgggcccat
gttgtcgatgtcaatcagcgactaacaaatttccacgaacttgtgcctgagatggcaaga
gagtatcccttcgaattagataatttccagaaagaagcagtatatagattggaaatggga
gatagtgtgttcgttgctgcacatacatcagcaggtaaaactgtcgtagcagaatacgcg
atagcgttggctgctaaacacatgacaaaggcgatctacacttctcctatcaaagcacta
tcgaatcaaaaattccgagatttcaagcaaacttttgacccttcaacagttggtattttg
accggtgatgttcagatcaatgcggaaggttcttgtctgataatgactactgaaatcctg
cgaagtatgctttataagggtgccgatttgattagagatgttgagtttgtcatcttcgat
gaggtccactacgtcaatgacgctgaacgaggagttgtttgggaagaagtcattatcatg
cttccagaacatgtcaacattatattgctttctgctaccgtaccaaacactaaagaattc
gcagattgggttggccgaactaaaaagaaggatatttatgtcatttctacaccaatgcga
ccagtacctttggagcatttcttgtgggcaggaaaagatatacataaaatcgtcgattcg
aaatcccgatttattggtgatggatacaaatcagctcaagaagctacgaggaggaagcaa
gataaagaacgtgaagcaaatggattaccacctgtacaacaaactggcggtagaggtgga
gcacctacaaaagcaagagatttacctacaggtaaaaatgcaccattcaccaatataggt
gcaggacgtacacatacaaatagaggtggaggtaatggtgcacccgccccggccgttcct
gctagaggaggtggtggagctggaagaggtggaggaagaggtggtagaggtggattcggt
ggaagggcaagtcatcaactcgatcaaaatgtttggacacatcttatagaatacttgaag
aaaaatacattattaccagtggtaaacttcgttttcagtaagaaaagatgtgaagaatat
gccgaaacccttcaaagcaaagatttgaataccgcaaaagagaaaagtgaagttcatctc
acttgggaaagggcgttgaccagattaaaaggttccgataaaaccctcccccagatattg
agaatgagagatctgcttagtagaggtatcggtgttcatcatggtggtcttttaccactt
gtcaaggaggtcgttgagttgcttttctctcgaggtttggtcaaagtgcttttcgctacc
gaaacttttgccatgggagttaacatgcctgcgaagtgtgtagtattttcaggtattcga
aaacatgatggaacttcattccgaaatctgttacctggtgaatatacacaaatggcaggt
agagcaggtcgaagaggtctagataccactggtactgttatccttttgagtggtgatgaa
ctacctacggtgacggaattgaatgaaatgatgcttggtacaccaaatagattatcatca
caatttagattaacatataatatgatattgaatttattgagagttgaagctttgaaagtt
gaagaaatgattaaaagaagtttctcagaaaacgctactcaaaaaatggctcctgaacaa
caacgtcaaattgctcatgccgaaaaacaacttgctagactacctaatgtagaatgtgaa
gtttgtaaaccagacatcgacgcattttaccagttgtcttcggaaattgtcagagtcaat
caatcgatatttaaacaagcttcgtacgctcaaaatgcgtctaaaattttcgtttctggt
agagtggtaatattacggaatggacatctacctggaaaccttgctattttacttcggagt
gctactaatatcatgacagatggcgtcaaatccgatgcaaaggcctttagaatgttagtt
cttgttacacctggtcaaagatccaggaaagaagatgtcaaggaatcagatgtgcctcct
cgatacccacctgtattgcccaagggctctttcccaaatcctcaatgggaaatagccatt
tacgataccactagtttctccttcgttactggtcagattctcaaagtcgatcacactgcc
atcgtagataagagtagtaaacaagcgagagacgatgctttacataatctcaccctattg
catgaagagctatcatcgctacctgaactacctgaagttgattggtcgagaattagatca
gtagaattcgtcgacgctatcagacagcgggcaatcttgaacgatagattgagtaaactt
ggatgtcaattatgtgaagatttccaagatcactacgctacattgcatgaaagaaaagta
gttgaatcaggattgatttcattaaaattagctttaagtgatcaaaatttagaattatta
ccagattataattctagagttgaagtattgaaaaaattatcatttattgatgaaaattca
acagtattattgaaaggaagagtagcatgtgaaattaattctgcaccagaattaatttta
actgaattaattttagaaaatattttatctgaatatgaacctgaagaagttgttgctttg
ttatcaatatttgtatttgttgaaaaatctgattcacaacctattatacctgaaaaaatt
caaaatggattagaagttatatataaaatcgctaatgaaattgaagttcaacaagataaa
tgttcaattcaatatgatcaattccaagagaaatataaaactggtttagttgaagttgtt
tatgaatgggctaagggaatgccgttcaaccagattactgaattgactgatataccagaa
ggtacaattgttagagttataactagattagatgaaacttgtagagaagtcagagatgct
gctagagttattggtgatgctgaactattccagaagatggaagctgcacaagcattaatt
aagagggatatcgtatttgctgctagtttggtgagtctctacgtgtcttcgtctaaacaa
aaacagacattaccagttgcttaa

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