Kwoniella dendrophila: 91097703
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Entry
91097703 CDS
T11323
Symbol
L201_007034
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
kep Kwoniella dendrophila
Pathway
kep03013
Nucleocytoplasmic transport
kep03015
mRNA surveillance pathway
kep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91097703 (L201_007034)
09122 Translation
03013 Nucleocytoplasmic transport
91097703 (L201_007034)
03015 mRNA surveillance pathway
91097703 (L201_007034)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kep03019
]
91097703 (L201_007034)
03041 Spliceosome [BR:
kep03041
]
91097703 (L201_007034)
Enzymes [BR:
kep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
91097703 (L201_007034)
Messenger RNA biogenesis [BR:
kep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
91097703 (L201_007034)
Spliceosome [BR:
kep03041
]
Complex C
Other components
EJC/TREX
91097703 (L201_007034)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
91097703 (L201_007034)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
CMS1
DNA_ligase_A_N
Ned1_M
Motif
Other DBs
NCBI-GeneID:
91097703
NCBI-ProteinID:
XP_066078842
UniProt:
A0AAX4K380
LinkDB
All DBs
Position
10:complement(join(121470..121591,121663..121844,121907..122016,122076..122207,122274..122392,122886..123187,123274..123382,123452..123519,123584..123732))
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AA seq
430 aa
AA seq
DB search
MSRPDEEELVDYDEAAEETFAPAATTATNGDKADGDKKGSYVGIHSTGFRDFLLKPELLR
AISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQQIEPVDGEVSIVI
LCHTRELAYQIRNEFARFSKFMTNVRTGVFYGGTPISADQEILASKEKCPHIVVGTPGRT
MALVRDKKLNASKVKHFVLDECDKMLETLDMRRDVQEIFRATPHHKQVMMFSATLSKDIR
TTCKKFMQSPLEIYVDDETKLTLHGLQQYFLKLEEKEKNRKLNDLLDNLEFNQVCIFVKS
VARATQLDALLQECNFPSICIHSALPQQERISRFQQFKAFEKRILVATDIFGRGIDVERV
NVVINYDAPTDADSYLHRVGRAGRFGTKGLAISFVSSDGDSEVLQKIQERFTVAIPTLPE
TIDPATYMTS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacctgatgaagaagagctcgttgattacgatgaagccgccgaggaaactttc
gccccagccgccaccaccgctacaaacggtgacaaagcagatggtgataagaaaggttca
tacgttggtattcactcaactggtttcagagatttccttttaaaacctgaattacttcga
gctatttcagatctcggtttcgaacatccttctgaagtacaacaagaatgtattcctcaa
gcaattcttggtactgatgttttatgtcaagctaaatctggtatgggtaagacagctgtc
ttcgtacttgctgctttacaacaaattgaacctgttgatggagaagtatcaatcgtaatt
ttatgtcatacaagagaattagcttatcaaattcgaaatgaatttgctcgattttctaaa
ttcatgactaatgtaagaactggtgtattttacggtggaacaccaatttcagcagatcaa
gagattttagcttcaaaagaaaaatgtccacatatcgttgttggtacaccaggtagaaca
atggctttagttagagataaaaaattaaacgcatcaaaagttaaacacttcgttcttgat
gaatgtgataaaatgcttgaaacacttgatatgcgaagagatgtacaagaaattttccga
gctacacctcatcacaaacaagtcatgatgttctcagccactctttcaaaagatatcaga
actacatgtaaaaaattcatgcaaagtcctctcgaaatctacgtcgatgatgaaaccaaa
ttaacccttcacggtcttcaacaatatttccttaaactggaagaaaaagagaagaacaga
aaactcaacgatttactcgataaccttgaattcaaccaagtctgtattttcgtcaaatca
gttgctagagctactcaacttgatgctttattacaagaatgtaacttcccttctatctgt
attcactctgcccttcctcaacaagaacgtatctcacgattccagcaattcaaagctttc
gagaaacgtatcttggtagcaacagacatctttggtcgaggtattgatgttgaacgagtc
aacgtagtcatcaactacgatgctccaactgatgctgactcatatctccatcgagttggt
agagctggtagattcggtaccaaaggtcttgccatttcattcgtttcaagtgacggagat
tctgaagtattacaaaagattcaagaaagattcacagtcgctattccaacattacctgaa
accattgatcctgctacatatatgacctcttag
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