Kwoniella europaea: 91100999
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Entry
91100999 CDS
T10999
Symbol
V865_002195
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ker Kwoniella europaea
Pathway
ker03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ker00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91100999 (V865_002195)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ker03019
]
91100999 (V865_002195)
03041 Spliceosome [BR:
ker03041
]
91100999 (V865_002195)
Messenger RNA biogenesis [BR:
ker03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
91100999 (V865_002195)
Spliceosome [BR:
ker03041
]
Complex B
Other components
Prp19-related factors
91100999 (V865_002195)
Complex C
91100999 (V865_002195)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
MIT
ARM_TT21_C
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
91100999
NCBI-ProteinID:
XP_066082096
UniProt:
A0AAX4KDP0
LinkDB
All DBs
Position
1:join(5780387..5781175,5781269..5782419,5782471..5782552,5782612..5782812,5782883..5783399,5783500..5783855)
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AA seq
1031 aa
AA seq
DB search
MSAHDSPLDSLSSRFPLTFPVPTPLTHPHLISASDLATEEDLLHNPDNLRSWLSYIHQLK
ERIIANEPPKVDEPSPEERLLGPLSSHVAREGLQQLTMVYERAVAVFPTSFKLWRSYYQM
RQSYVLGELTSSAKTARAQHAKRGSGFKTNVREQLEAAEEANEWVGGLDGIVGYEEWRSL
IATGERMIACLSHLPVPWLLHLSILFHPKCPATFKRTYARRTFDRALRTLPPSLHGRVWG
LYLRWAEMIGGEAGERVWRRFLKVDASLTERHITYLLDSTPPRPLAASKYLLSLARRASK
NLYSSLEGKSPYQLFVDFLELVERYADEVGMDEEQTLELKAAKQVAQDEITKPDVEDTPA
PAEEPASIHGRLIRIAGPPVPVEQGKIFKPKDAISTKKGPEELPYDEDTDPSNSRLLDVE
GIVERDGLEVYKDQAGRLWTGLATYWIKRGEFDRATSTFERGLAAVVTIRDFTQIFDAYA
EFSETMISTLMDALADEDNLADEEFDAEETEKELDERMKKFEELMDRRPFLLNEVLLRRN
PNEVVEWEKRVALYGDDDEKVVETYVKALDTINPRKATGPLYPLYVNFAKFYEEGGSKDP
ESGEPRNEPDLKQARKIMERATKVPYKSVDELAEVWCEWAELELRNENYDEAIRLMQRAT
TIPRDPKKINFYDESLSPQQRLFKSLKIWSFYSDLEESIGSVESTKAVYDKIMELKIANA
QVIVNYAAFLEENKYFEESFKVYERGIELFHPSVAFEIWNIYLSKFVKRYGGKKLERARD
LFEQALENCPPKFCKPIYLLYGKLEEEHGLAKRAMGIYDRACTTVQDSDKFDMFTIYIAK
ATANFGLPATRPIYERALESLPDKQTAEMCKRFARMERKLGEIDRARAIYAHASQFCDPR
IDKEFWEEWNLFEVETGSEDTFREMLRIKRAVQAAFNTETSFIAAQTAAAAKGAEKPTDT
AKDAADPMAAMERELSGTDGAGAGAATSKKTGGPAFVASTLKTQNAHGIDQAEDEGEVAN
PDAIEMDEDEF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcatgactcccccctcgactccctatcttcccgattcccactcactttcccc
gtccccacgcccctcactcatcctcatctcatctccgcctcagatctcgcaacagaggaa
gacctattgcacaaccctgacaaccttcgatcatggctctcatacatccatcaactgaaa
gaacgtataatagccaatgaacctcccaaagtagatgaaccatcacccgaggagagactc
ctaggtccattatccagtcatgttgcccgagagggtttacagcaattgacaatggtttac
gaaagggccgtagcagtcttccctacaagtttcaaactttggagatcctattatcaaatg
agacaatcctacgttctgggagaattgacaagttcagctaagaccgcgagagcgcaacat
gccaaacgaggttcgggatttaagaccaatgtgagagaacagttggaagctgctgaagaa
gccaatgagtgggtaggaggattagatgggatagtgggatatgaagaatggagatcgttg
atagctactggagaaaggatgattgcttgtctgagtcatttacctgtaccatggttatta
cacctttcgattttgttccacccaaaatgccctgcaacgttcaagagaacctatgcgaga
cgaacgttcgatagagcactcagaacgctccctccaagtttacatgggagggtctggggt
ctgtatcttagatgggctgagatgattggtggagaagctggtgagagagtttggagaagg
tttttaaaggtcgacgcaagtctgactgaaagacatatcacatacctccttgactcgact
ccgcctcgtccactcgctgcgtccaaataccttctctccctcgctcgtcgcgcatccaag
aacctgtactcatcactcgagggcaaatcaccgtatcagctgtttgtcgatttcttagag
ctggtagaacggtatgcagatgaagtaggtatggacgaagagcagacattagaacttaaa
gcggctaagcaagtggctcaagatgaaataacgaaacctgacgtagaagacacacctgct
ccagcggaagaaccagctagtatacatggtcgattgattagaatcgctggtccacctgtc
ccagtagaacagggaaagatattcaaacctaaagatgctatctcaactaagaaaggtcca
gaggagctaccttatgacgaggataccgatccgtccaattcacgcttattagacgtagaa
ggtatagtagaaagagatggattagaagtatataaagatcaagctggtagattatggacg
ggtctggcgacatattggatcaaacgtggtgaatttgatcgagcgacatcaactttcgaa
agaggtttagcagccgtggtgactattagagatttcactcagatatttgacgcttatgct
gagttttccgaaactatgatttctactttgatggatgctcttgccgatgaagataatcta
gcagatgaggaatttgatgctgaagagactgagaaagaattagatgagaggatgaagaag
tttgaagagttgatggatagaagaccgttcctcctcaatgaagttctcctcagaaggaat
ccgaacgaggtggtagagtgggaaaagcgagtagcgctttatggagacgacgatgagaaa
gtggttgaaacgtatgtgaaagctttagataccataaatccaaggaaggccactggaccc
ctatatcctctatatgtcaattttgcgaagttctatgaagagggtggaagcaaagatcca
gaaagtggagaaccaagaaatgaacctgatttgaaacaggctaggaagatcatggagaga
gctacgaaagtaccctacaagagtgtagatgagttggcagaagtatggtgtgaatgggca
gaattggagttgaggaatgagaattacgatgaggctatccgtttgatgcagagagccact
acgataccccgagatcccaagaagatcaacttttatgacgagtctctgtcccctcaacag
cgtctgttcaagtccctcaagatatggtctttctacagtgatctcgaagaatccatcggt
tcagtcgaatcgacaaaagcagtctacgataagattatggaattgaaaatcgccaatgct
caggtcattgtcaactacgctgctttcctggaagagaacaagtatttcgaagagagtttc
aaggtgtacgaacgaggtatcgagttattccatccatctgtcgcgttcgaaatatggaac
atctacctatccaaattcgtcaaacgatatggcggtaagaagctcgaaagggcaagagat
ctgttcgaacaggcattagagaattgtccacctaaattctgtaaaccgatttatctccta
tatggtaaactcgaagaagaacatggtttggctaagagagcgatgggtatttacgatcga
gcttgtacgacagtacaggattcagataaattcgatatgtttacgatatacattgcgaaa
gccacagccaactttgggttacccgccactcgaccgatatacgaaagagctcttgagagc
ttaccggacaaacagactgcggagatgtgtaagaggtttgcaaggatggagaggaaactt
ggtgaaattgatagagccagagctatctatgctcatgcgagtcaattctgtgatcctagg
attgataaggagttctgggaagaatggaacttgtttgaggtcgaaactggatccgaggac
actttccgagagatgttacgtatcaagcgtgcagtccaagctgcattcaacaccgagaca
tccttcattgctgctcaaacggccgcagctgccaaaggagctgagaaacccaccgataca
gctaaagacgctgctgatcctatggcagctatggaaagagagttgtcaggaacggatggt
gctggagccggtgcagcgacatcgaagaagactggtggaccggcctttgtggctagtacg
ttgaagacgcagaatgctcacggaattgatcaagcggaggatgaaggtgaggtcgcgaat
ccggatgccatagagatggatgaagatgagttttag
DBGET
integrated database retrieval system
