KEGG   Kwoniella europaea: 91101914
Entry
91101914          CDS       T10999                                 
Symbol
V865_003110
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
ker  Kwoniella europaea
Pathway
ker03018  RNA degradation
ker03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ker00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    91101914 (V865_003110)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    91101914 (V865_003110)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ker03019]
    91101914 (V865_003110)
   03041 Spliceosome [BR:ker03041]
    91101914 (V865_003110)
Messenger RNA biogenesis [BR:ker03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     91101914 (V865_003110)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     91101914 (V865_003110)
Spliceosome [BR:ker03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    91101914 (V865_003110)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 91101914
NCBI-ProteinID: XP_066083006
UniProt: A0AAX4KGC7
LinkDB
Position
1:join(8224096..8224219,8224445..8224558,8224642..8224673)
AA seq 89 aa
MDSASPQPEEAAAAAGSPSEFLKNIVGKRVKVRIGSGVDYHGLLTCLDGYMNVALEDTEE
WANGRKTAEYGDCFLRGNNVLYISALEDL
NT seq 270 nt   +upstreamnt  +downstreamnt
atggactcggcatctcctcagccagaagaagcagcagctgcagctggatctccatccgag
tttttgaagaatatagtggggaagagggtgaaagtcaggataggtagtggggtagattat
catggccttttgacatgtctggatggatacatgaatgtagcgttggaggatacagaagaa
tgggcaaatggtaggaagacagcggaatatggtgattgtttccttcgagggaataatgta
ctgtacatctctgcattggaagatctgtaa

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