Kwoniella europaea: 91104918
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Entry
91104918 CDS
T10999
Symbol
V865_006117
Name
(RefSeq) uncharacterized protein
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
ker Kwoniella europaea
Pathway
ker03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ker00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
91104918 (V865_006117)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ker03019
]
91104918 (V865_006117)
03041 Spliceosome [BR:
ker03041
]
91104918 (V865_006117)
03009 Ribosome biogenesis [BR:
ker03009
]
91104918 (V865_006117)
03016 Transfer RNA biogenesis [BR:
ker03016
]
91104918 (V865_006117)
Enzymes [BR:
ker01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
91104918 (V865_006117)
Messenger RNA biogenesis [BR:
ker03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
91104918 (V865_006117)
Spliceosome [BR:
ker03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
91104918 (V865_006117)
Complex C
U4/U6.U5 tri-SnRNP related factors
91104918 (V865_006117)
Ribosome biogenesis [BR:
ker03009
]
Eukaryotic type
Pre-60S particles
Helicases
91104918 (V865_006117)
Transfer RNA biogenesis [BR:
ker03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
91104918 (V865_006117)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
91104918
NCBI-ProteinID:
XP_066085974
UniProt:
A0AAX4KNR6
LinkDB
All DBs
Position
1:complement(join(16074676..16074849,16074936..16075136,16075222..16075587,16075670..16076032,16076115..16076356,16076458..16076722,16076827..16077266,16077326..16077682,16077782..16077986,16078053..16078307,16078378..16078785))
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AA seq
1091 aa
AA seq
DB search
MAPKGSNSNSSAGPSTPREKKHKKRNAKERSVETSDRPIKSARIDEIDNNDDVGEEEENE
TAQAGGDAMDMLDSGVGSSSKKGDAMEALESGQDVEGATVVKADEFETEAEREVEASKGL
DGAAAGEEGKMKLVHQVRHQVAVPPNYPYIPISQHKRNDPPAREYKFTLDPFQFVATSCI
ERNESVLVSAHTSAGKTVVAEFAIATCLKEGRRVVYTSPIKALSNQKYREFLETFGDVGL
MTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETII
LLPHTVRYVFLSATIPNSMEFAEWITSTHEQPCHVVYTDFRPTPLQHYLFPAGSEGIYLV
VDERSNFREDNFQKAMAALAAGQGEDSADPNSGKGRKGNKTRKGGAMKGEKSDIYKIVTL
IMRRNLNPVIIFAFSKRECEDLAMQMQKFDFNTPDEASTVQQVFENAISGLSDDDKKLSQ
IEGILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKALFATETFSIGLNMPAKTVVFTS
VRKFDGKDFRNLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKIEPDAAKGMVKGQADRLD
SAFHLGYNMIINLMRVEGVSPEYMLERCFFQFQNSMSVPVLEKQLKEAEEARDAIVVEKE
DEISEYYELRQQLKEKGQDFQAVISHPSYSLKFLQAGRLVEIRDGDKDFGWCVVVAYNKV
VNPKGRTPIFTESDPPQKQYVVDVLTKVASGTASGNPKDRSSSALIPPSGNDQGEVAIIA
CSLTTVQAISQYRINLPKDLRGQSEKNTAFKAVGEIKKRMKDGPPLLDPIKSMGIEDKSF
KELVKKIAILEQRLGSLPITTSKDLPRLYDLYDQKQESINNVKQLKRKINSVHDILQLEE
LKSRKRVLRRLGFTTSDDVVEMKGRVACEISTGDELMLTEMMFGGTFNDLTPEQCAAVLS
CFVFQEKSEAKVRLKEELAAPLRVLQETARRIAKISNESGIPIVEEEYIQSFKVEMMDAV
LQWCKGAKFSDICNLTDIFEGSIIRCFRRLQELIRQMGQAAHAIGNTELEEKFGKSMELL
ERPNTVVFNPS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaaggtagtaacagcaactcctctgctggaccatcgactccacgagagaaa
aaacataaaaagcggaatgccaaagaacgaagtgtcgagacgtccgatcgaccgattaag
tctgctagaatagatgaaatcgacaacaacgatgatgtaggggaagaggaagagaatgag
actgcacaagctggaggagatgctatggatatgctagattccggtgtaggatcttcctca
aagaagggtgatgctatggaagcgctggaaagtggtcaagatgtggaaggtgcaacggtt
gtaaaagctgatgagtttgagacggaagctgagagggaggtagaagcttcgaagggtctt
gatggagctgctgcaggggaggaaggcaagatgaaactggttcatcaggttcgacatcaa
gttgccgttccacccaattacccatacataccgatatctcagcataagcgaaatgaccct
ccagcaagagaatacaaattcactttggatcctttccagttcgtcgctacatcgtgtatt
gaacgaaatgagtcggtgttggtatcagcacatacatcagcaggtaaaacggtagtagcg
gaatttgctattgctacttgtttgaaagaaggaaggagagtagtttataccagtcctatc
aaagcattgtcgaatcagaaatatcgagaattcttagaaacgtttggtgatgtcggattg
atgactggagatgtcaccatcaaccctactgcatcttgtttggtcatgacaacggaaatt
ctgagatccatgttgtataggggttcagaagttatgagggaagttgcttgggtgatattc
gatgaggtgcattatatgcgagataaggaacgaggtgtcgtgtgggaagagactatcatt
ctactcccccacacagtccgatacgtcttcttgtcagccactatacccaattctatggaa
ttcgcagaatggataacgtcgacacacgaacaaccatgtcatgtcgtatatacggacttc
cgtcctacgcccttgcagcactacctgttccccgctggatccgaaggaatctatctggtc
gtggatgaaagaagtaactttagagaagataatttccaaaaagccatggctgccctggct
gcagggcaaggtgaagattcagctgatcctaacagtggaaaaggaaggaaagggaataaa
actaggaaaggcggagctatgaaaggtgaaaaatccgatatatacaagatagtgacatta
atcatgcgacgaaaccttaatccagtcatcatatttgcattttcaaagagggaatgtgaa
gatttagctatgcaaatgcaaaagttcgatttcaatacacccgatgaagcttcgaccgtt
caacaggtattcgaaaatgccattagtggattatcagatgatgataagaaattatcccaa
atagaaggtatcttaccactcctcaagagaggtattggaatccatcatggtggtttatta
cctattttaaaagaagtaatagagattttgttccaagagggattgatcaaggctcttttc
gctactgagacgttctcgattggattgaatatgcctgcgaagacggtcgtttttactagt
gttaggaaatttgatgggaaagatttcaggaatttatctggtggtgaatacatccaaatg
tcaggaagagccggacgaagaggtttggatgcacgaggaatagtcatcatgatgtgtgac
gagaagattgaacctgatgctgctaagggtatggtcaaaggtcaagcagatagattggat
tcagctttccacctaggatacaatatgattattaatttgatgagggtcgagggtgttagt
ccggaatatatgctggaaaggtgtttcttccagttccagaatagtatgagtgtgcctgtt
ttggagaaacaattgaaagaagcggaggaggctagagatgcgatagtcgtagagaaggaa
gatgagatcagcgaatattacgaacttcgacaacagctgaaagaaaaaggtcaagatttc
caagctgtcatttcacatccttcttacagtctgaaattcttacaggctggtagactggtg
gagatccgagatggcgataaagatttcggttggtgtgtagttgtagcctacaacaaggtc
gttaatcctaaaggtcggacaccgatattcaccgaatctgatccacctcaaaaacaatac
gttgtcgatgtacttacgaaagtagcttctggtacggcttctggcaatcctaaagatcga
tcttcatctgctttgatcccaccctccgggaacgatcaaggtgaggtagctatcatagct
tgttcactcaccactgtacaggctatctctcagtatagaatcaacttgcctaaagatctg
aggggtcaatcggaaaagaacactgcttttaaagctgttggagagatcaagaagagaatg
aaagatggtcccccacttttagatcctatcaagagtatgggtattgaagataagagtttc
aaggagctggtcaagaaaattgccattctcgaacagcgattgggatctttacctataacc
acttctaaagacttgccaagactgtatgacttgtacgatcagaaacaagaatcgatcaac
aacgtcaaacagctcaaacgaaaaatcaactcggtacatgatatattgcaattagaagag
ctcaaatctcgtaagagagtattaagaagattgggtttcacaacttcggatgatgttgtt
gagatgaaagggagggtggcatgtgagatttcgacaggtgatgagttgatgttgactgag
atgatgttcggtggaacgtttaatgatttgacgccggaacaatgtgcggctgtcttgagt
tgttttgtattccaggaaaagtccgaggccaaagtccgtctgaaagaggagttggcagct
cctttacgtgtactgcaagaaacagcacggaggatagcaaagatatccaacgaatctggt
atacccatcgttgaagaggagtatatacagagtttcaaggtggaaatgatggatgcggtc
ttacaatggtgtaaaggtgccaagttcagtgatatttgtaatctcacggatatatttgaa
ggatcgattatcagatgttttaggagattgcaagaattgattcgacagatgggtcaagct
gcacatgctattggtaataccgaattggaagagaagttcggaaagagtatggaattgctt
gaaagacctaacacagtggtgttcaatccatcgtaa
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