KEGG   Kwoniella europaea: 91104986
Entry
91104986          CDS       T10999                                 
Symbol
V865_006185
Name
(RefSeq) uncharacterized protein
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
ker  Kwoniella europaea
Pathway
ker03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ker00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    91104986 (V865_006185)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ker03019]
    91104986 (V865_006185)
Enzymes [BR:ker01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     91104986 (V865_006185)
Messenger RNA biogenesis [BR:ker03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     91104986 (V865_006185)
  mRNA degradation factors
   3'-5' decay
    Pan complex
     91104986 (V865_006185)
SSDB
Motif
Pfam: UCH_1 PAN2_N UCH Beta-prop_WDR36-Utp21_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_EML WDR55 FYVE_CARP1-2 Beta-prop_WDR3_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd KNTC1_N
Other DBs
NCBI-GeneID: 91104986
NCBI-ProteinID: XP_066086042
LinkDB
Position
1:complement(join(16244607..16244855,16244926..16245182,16245254..16245313,16245384..16245458,16245536..16245716,16245784..16245889,16245953..16246163,16246244..16246604,16246665..16246975,16247053..16247303,16247412..16247969,16248054..16248494,16248638..16248973,16249152..16249498))
AA seq 1247 aa
MTYNPLHLLTLPPTSIDPKPISTVISIDSFSDTIWLGTSSGTITALCTPLSLTRNVQFPA
HGSKLASVAQGGYLNMAAGINMAVRELRITDRDIWSLTEGGVSGRKRGGVVKWSVDDPSR
SLRSMAPNPVNSHEVIAGGTGPLILANTARGEIVRKVDIPNAPIVKLSPSLSSRSVLSAS
LSGQINLLDPRTGFKSQSSIVPVQAHTGGLNGADVQGNLVCTWGWTHMQGHPLPDPLVKI
YDIRTLRPLPPISFPAGPAFALLHPTDPSKLVISSQQGMLQTVDMSTGSTGSMFQQLDIN
SYVTSMALSPRGDYLAFGDADGNLHLWTNHDTGETAQLDENGQLVLPTFNGYDGIKPEWP
DQADPLPPIVWEDTTPLNLIGMPYYSEPLISNFPPDLYATDASPFFNPPLPIPTSVLNSM
KMVDFVGYATTPKELKGKRYVIPSRPGARNVHKNTNVNNQNGRLMNATNGRRNSEPRFRS
EKDKLEKKNGAKATKKTKKFTGGGGGGENQDLMNVDDEHVIEDDDDDDEQDVVMGDGEIP
KYYRKVEIKYSKFGIEDFDFEYYNRTAYSGLETDILNSYTNSLLQAIHYMPPIRAVATAH
ICVDCKKEHCLLCEAGFLFRMLEDAKGRNCQASNFSRAFSATPQASALGLMDDNDKSTAP
YGSLIQNFNRWLLSTFSTESIVDGETFEIRTKDIQDLSLKGSDEVQKASAIDQVLGVQIK
TTNTCRSCGFVSERDTTLHAVDLIYPKKTSTGTGRPKFDDVLKSSIFRENTTKAVCSNCK
SFAPLDSKRTLNSDRDQLPPVLSVNAMMTSNDLYEIWKNDHKSKTRFLEPTVQLVIDDGQ
KIGYEVKSLVVQIQEDERTPAHLVSFVKMSNDSGSNWIMFNDFLVRSISEEEVFNFPDQW
KVPSVIFLQRVDSSNLLDLNGLPKEIDKSVLFKDVSIAWNRRNALIKHKVLEENELPKPG
TLIAIDAEFVALQQEEMEFRSDGTKNILRPSHMSLARVSVLRGQGEKEGVPFIDDYIHTS
EAVVDYLTEFSGIKAGDLDPNNSPHTLVPLKVAYKKLRLLVDLGCIFIGHGLSKDFRTIN
IFVPPSQVMDTVNLFTIPGRHRKLSLKFLAWFLLKKDIQTNTHDSIEDSKFALLLYKIWK
GYDDTDDLRGFEGLMNDVFLEGSKTGFKPPIDRPPSPNAFPPLPAPPTQTLAQQIGGGKQ
QKSRKGSNKNNNQQQQQSNWNSENGENAGGGGGGGRGRGRGKPPRQW
NT seq 3744 nt   +upstreamnt  +downstreamnt
atgacctacaacccacttcatctccttacccttcccccaacgtccatcgaccctaaaccc
atctctaccgtaatcagcatcgactctttctcagatacaatatggctcggtacttcctct
ggaacaatcactgcattatgtacgcctctcagcctgacgcgcaacgttcagttcccggcc
catgggtcgaaattagcttcagtcgcccaaggggggtatctgaatatggctgctggaatc
aacatggctgtgagagagctcagaataacagatagggatatatggtcgttaactgaagga
ggagtcagtgggaggaagagaggtggggttgttaaatggagtgtcgacgacccctctcgt
tcccttcgatcaatggcccctaacccggtcaattcccacgaagtaatcgcgggcggtaca
ggtcccctcatactagccaacacagcaagaggagagatagtccgaaaggtcgatataccc
aatgcacccattgtgaaactttctccgtctctatcaagcagatcagtcttatcggctagt
ctatcaggacagattaacctcttagatccgaggacaggcttcaagtcgcaatcgtcaatt
gtacccgtccaggcccatacgggtggactgaatggggcggacgtacaggggaatttggta
tgcacctgggggtggacacatatgcaaggacaccctctacccgacccactagtcaaaatc
tacgatatcagaactcttcgtcctctaccacccatctcgtttcccgccggaccagcattc
gccttacttcaccccacagatccatcaaagctggtgatatcctcacagcaggggatgtta
cagaccgtcgacatgtcaactggatcgacgggatcaatgttccagcaactcgatatcaac
tcatacgtgacgagcatggccttatctccccgaggtgattatctggcttttggagatgcc
gatggcaacttacatctttggacaaatcacgatacgggtgagactgcgcagcttgatgag
aatggtcaattggtcttgccaactttcaatggttatgatgggattaaacctgaatggcca
gatcaggcggatcctttacctcctatagtctgggaagatactacccccttaaacctcatc
ggtatgccgtactattccgagccactaatatccaatttcccaccagatttatatgccaca
gacgcttcaccattcttcaacccgcctttacctatccctacatccgtgttgaattcgatg
aaaatggtagatttcgttggttatgcaactacgccaaaggaattaaaaggtaaacgatat
gttataccttctcgaccgggtgcacgtaacgttcataaaaatacgaacgtaaataaccag
aacggtagattaatgaatgctaccaatggaagaagaaatagtgaacctagattcagaagt
gagaaagataaattggagaaaaagaatggtgcgaaagccacaaaaaagaccaagaaattc
actggaggaggtggtggtggagaaaatcaggatttgatgaatgttgatgatgaacatgtg
atagaagatgacgatgatgatgatgaacaagatgtggtgatgggtgatggggagataccg
aaatattataggaaagtggaaatcaaatattccaaatttggtatagaagattttgatttt
gaatactacaatcgaactgcttactcgggactggaaaccgatattctcaattcctatacc
aattcattattacaagctattcattacatgccacctatacgagctgtggcgaccgcccat
atatgtgtagattgcaagaaagagcattgtcttctgtgcgaagctggattcctattcagg
atgctggaagatgcaaaaggaaggaactgtcaggctagtaatttctctagagcgttcagt
gccacgccacaagcatctgcattggggttgatggacgataatgataaatcgactgcaccc
tatggctcactcatccagaatttcaatagatggttgttgtcgactttcagtacggaatcg
atagtcgacggtgaaactttcgaaatacgcacgaaagatattcaagatctatctttgaag
ggatcagatgaggtgcaaaaggcatcagcgatagatcaggtattgggtgtgcaaatcaaa
actaccaatacgtgtaggagttgtggattcgtttcggaaagggatacaacgttacatgct
gttgatctaatatacccaaagaaaactagcactggcactggtagacccaagtttgatgat
gtcctcaaatcctcgatattcagagaaaacactaccaaagcagtatgcagtaattgcaag
tcgtttgcaccgttggattccaaacgtaccctcaacagtgatagagaccaattaccacct
gtgttgagcgtcaatgcgatgatgacttcgaatgatctatacgagatttggaaaaacgac
cataaatccaaaacgagatttttggagccaactgttcaactcgtcattgatgatggacag
aaaatcgggtatgaagtgaaaagtttggtagttcagatacaggaggatgaacgtacacct
gctcatctggtctctttcgttaaaatgtcgaacgattcaggttccaattggataatgttt
aatgatttcttggtaagatccatatcggaggaagaagttttcaacttcccggatcaatgg
aaagtcccttctgtaattttcctccagagggttgattcttcgaatttattggatttgaat
ggattaccaaaagagattgataagagtgtgctgtttaaggatgtttctattgcttggaat
cgacgtaatgcgctaatcaaacataaggttttggaagaaaatgaattacccaaacctggg
acacttatagctatagatgctgagtttgtggctttacagcaggaagaaatggaattccga
tcagatggaaccaaaaacatccttcgaccttctcatatgtcccttgccagagtttcggta
cttagaggacagggtgaaaaggagggtgtgccgtttatagatgattatatacatacgagt
gaggctgtcgtagattaccttactgagttctcgggtatcaaggctggagatttggatcca
aacaactcgcctcatacgttggttcctctcaaggtggcgtacaagaaattgaggttattg
gtcgatctgggatgtatattcattggtcatggattgtccaaagatttccgaacgattaat
atcttcgtacctccatctcaagtcatggacacagtcaacctgttcactataccaggtcga
catcgtaaactttcattaaaattcttggcttggttcttactcaagaaagatattcaaacc
aatactcacgattcgatcgaagattcaaagttcgctttgttactatacaaaatatggaaa
gggtacgatgatacagatgatttgagagggtttgaggggttgatgaatgatgtgtttttg
gaaggaagtaagacgggattcaaaccaccaattgatcgtccaccttcaccaaacgctttc
ccaccgttacctgcgccgcctactcagacacttgcacagcagattggaggaggtaaacaa
cagaaatctagaaaaggatcaaataagaataacaatcagcagcagcagcagtccaattgg
aactccgagaatggtgagaatgcaggcggaggaggaggagggggaagaggtagaggtagg
ggtaaacctcctagacagtggtaa

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