Kwoniella europaea: 91105302
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Entry
91105302 CDS
T10999
Symbol
V865_006501
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ker Kwoniella europaea
Pathway
ker03013
Nucleocytoplasmic transport
ker03015
mRNA surveillance pathway
ker03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ker00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91105302 (V865_006501)
09122 Translation
03013 Nucleocytoplasmic transport
91105302 (V865_006501)
03015 mRNA surveillance pathway
91105302 (V865_006501)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ker03019
]
91105302 (V865_006501)
03041 Spliceosome [BR:
ker03041
]
91105302 (V865_006501)
Enzymes [BR:
ker01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
91105302 (V865_006501)
Messenger RNA biogenesis [BR:
ker03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
91105302 (V865_006501)
Spliceosome [BR:
ker03041
]
Complex C
Other components
EJC/TREX
91105302 (V865_006501)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
91105302 (V865_006501)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
DNA_ligase_A_N
Ned1_M
Motif
Other DBs
NCBI-GeneID:
91105302
NCBI-ProteinID:
XP_066086356
UniProt:
A0AAX4KQK0
LinkDB
All DBs
Position
2:complement(join(415591..415712,415785..415966,416043..416152,416225..416356,416428..416546,417115..417416,417480..417588,417655..417722,417784..417932))
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AA seq
430 aa
AA seq
DB search
MSRPDEEELVDYDEAAEETFAPAATTATNGDKADGDKKGSYVGIHSTGFRDFLLKPELLR
AISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLACLQQIEPVDGEVSIVI
LCHTRELAYQIRNEFARFSKFMTNVRTGVFYGGTPISADQEILASKEKCPHIVVGTPGRT
MALVRDKKLNATKVKHFVLDECDKMLETLDMRRDVQEIFRATPHHKQVMMFSATLSKDIR
TTCKKFMQSPLEIYVDDETKLTLHGLQQYFLKLEEKEKNRKLNDLLDNLEFNQVCIFVKS
VARATQLDALLQECNFPSICIHSALPQQERISRFQQFKAFEKRILVATDIFGRGIDVERV
NVVINYDAPADADSYLHRVGRAGRFGTKGLAITFVSSDGDSEVLQKIQERFTVAIPTLPE
TIDPATYMTS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacctgacgaagaagagctcgttgattacgatgaggccgccgaggagaccttc
gccccagctgctacaaccgctaccaatggtgacaaagcagatggtgataagaaaggttct
tacgtcggtatccactcgacaggcttcagagatttcctcttaaaacctgaattacttcga
gccatctcagatctcggttttgaacatccttccgaagttcaacaagaatgtatcccccaa
gctatcttaggtactgatgtcttgtgtcaagctaaatccggtatgggtaagaccgccgta
ttcgtactcgcttgtttacaacagatcgaacctgtcgatggagaggtatcaatcgtgatc
ttatgtcacactcgagaattggcttatcaaatccgaaatgaatttgcgagattctccaag
ttcatgaccaacgttcgaaccggtgtgttctacggtggtacccccatctctgccgatcaa
gagatcttagcctcaaaggagaaatgtccacacatcgtcgtaggaactccaggtagaacg
atggctttggtcagggataagaaactcaacgcgacaaaggtcaaacacttcgtattggac
gaatgtgataagatgctagaaacacttgacatgcgaagagatgttcaagagatcttccga
gctactccccaccacaaacaagtcatgatgttctccgccaccctatccaaagacatccga
actacttgtaagaagttcatgcaaagtcctctggaaatctacgtcgatgacgagaccaaa
ttgaccctccacggtcttcagcaatacttcctcaagctcgaggagaaggagaagaacagg
aaactcaacgacttgctcgataacctcgagttcaaccaggtctgtatctttgtcaaatct
gttgcccgagccactcaactcgacgcgttattgcaagaatgcaatttcccatctatctgt
atccactctgctcttcctcaacaagaacgtatctcacgattccagcaattcaaagctttc
gagaaacgtattttggtagctacggatattttcggtcgaggtatcgatgttgaacgagtc
aacgtagtcatcaactatgatgctcctgctgatgctgactcgtacctccatcgagtcggt
agagcaggtcgattcggtaccaagggtttagccatcacattcgtatcttccgatggtgat
tccgaagtccttcaaaagattcaagagagattcaccgttgccattcctactttacctgag
actattgatcctgccacttatatgacttcttaa
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