Kwoniella europaea: 91105811
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Entry
91105811 CDS
T10999
Symbol
V865_007010
Name
(RefSeq) endoribonuclease YSH1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ker Kwoniella europaea
Pathway
ker03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ker00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91105811 (V865_007010)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ker03021
]
91105811 (V865_007010)
03019 Messenger RNA biogenesis [BR:
ker03019
]
91105811 (V865_007010)
Transcription machinery [BR:
ker03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91105811 (V865_007010)
Messenger RNA biogenesis [BR:
ker03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
91105811 (V865_007010)
U7-dependent histone pre-mRNA processing factors
91105811 (V865_007010)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
91105811
NCBI-ProteinID:
XP_066086863
UniProt:
A0AAX4KR27
LinkDB
All DBs
Position
2:join(1799781..1800067,1800218..1800263,1800333..1800424,1800500..1800837,1800922..1801352,1801414..1801710,1801805..1802059,1802124..1802265,1802329..1802579,1802653..1802796)
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AA seq
760 aa
AA seq
DB search
MHRHGRRQFRSHHGHNQQQSAQAPIQVLSPAGDDEPLTITMLGAGQEVGRSCCVIEHRGK
KVVCDAGLHPAHPGLGSLPFIDEVDWSTVDAILVTHFHVDHAAALPYIVEKTNFKDGNGK
VYMTHATKAIYGLTMMDTVRINDQNPDVSGKLYDETDVQSSWQSTIAVDYHQDIVISGGL
RFTPYHAGHVLGASMFMIEIAGLKILYTGDYSREEDRHLVVAEIPPIKPDVMICESTFGV
HTLPDRKEKETQFTTLVSNIVRRGGRCLMPIPSFGNGQELALLLDEYWSEHPELQNVPVY
FASGLFQRGMRVYKTYVHTMNSNIRSRFARRDNPFDFKFVKWLKDPKKLNEHKGPCVVMA
SAQFMSFGLSRELLEDWANDSKNGVIVTGYSIEGTMARTLLSEPDHIESLKGGTIPRRLT
VKEISFGAHVDYAQNSKFIQEIGAQHIVLVHGEASQMGRLRAALRDTYATKGQEINIHTP
RNCEPLVLTFRQERVVKAIGSLAANRPVHGTPLKGLLVSKDFSYTLLDPKDLKDFTGLST
STLVQKQSIPIGVDWSVIRWHLEGMYGEVEEGTDEEGRPSFTIMNAVKVVQISEIVVEIQ
WSSNSSNDMIADSALAVLLGIDGSPATVKLTSTPHQHSHHDHSHEKGDSMMNKHSHVDAS
GNDEFDRIRMFLEAHFGEVSGPNVTVAEGEEDELLVMTVKIDEVMAKVDLISMRVESDSP
DLKRRVETVLEMALTTLKPLSRSFIGSGMDLNLENIAVTA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgacacggcaggaggcagttcagatctcatcatggtcacaaccaacaacaatcc
gcccaagcacctatacaggtactttcacccgcaggcgatgatgagcccttgacgataacg
atgttgggagcaggccaggaggtcggtagatcatgttgtgtgatagaacatcgagggaag
aaggtggtctgcgatgcgggtttacatcctgctcatccgggtttgggtagtttgccattt
atagatgaggtcgattggtcgacggtggatgctattttggtgactcactttcacgtcgac
catgcggctgctctcccatatatagtggaaaagacaaatttcaaagatggtaatgggaaa
gtatacatgactcatgctacgaaagctatctacggtttgacaatgatggatactgtaagg
atcaacgatcaaaaccccgacgtatcaggaaaactatatgacgagaccgacgtacaatcc
tcctggcaatcaacgatagcagttgactaccatcaagatatagtcatctccggtggactg
aggttcacgccatatcatgccggtcacgtattgggtgcatcgatgttcatgattgaaatt
gccggattgaagatattgtacacgggagactattcgagagaggaggatagacatttggtg
gtcgctgaaataccaccaatcaaaccggatgttatgatttgcgagagtaccttcggagtg
catactctacctgataggaaggagaaggaaacccagttcaccacccttgtatcgaatatc
gttcgacgtggaggtagatgtctaatgccaatcccttcattcggtaacgggcaggaactt
gccctgttattagatgaatactggtctgaacatcccgaactacaaaacgtccctgtatat
ttcgcctcgggtttattccaacggggaatgagagtgtacaagacctacgtccacacgatg
aactcgaatatcagatcgagattcgctcgaagagataatccattcgatttcaaattcgtc
aaatggctgaaagatcccaagaagttgaacgaacataaaggtccttgtgtggtcatggcc
tctgctcaatttatgtctttcggtttgtcgagggaattattggaagattgggcgaatgac
tcgaagaatggggtgatagttactggttattccattgaaggtactatggcaaggacgtta
ttatccgaaccagatcatatcgaatcactgaaaggaggtacgatacctagacgattgaca
gtcaaagaaatttcgtttggcgcgcatgtagattacgcacaaaactcaaagtttatccag
gagattggtgcccaacatattgtcctggttcatggggaggcatcacagatgggtagactg
agagctgctttgagagacacgtacgcgacaaaaggtcaggagatcaacatccatacgccc
aggaattgcgaaccgttggttctgacgttcaggcaggagcgagtcgtcaaggctattgga
tctttagccgccaatcgaccggttcatggtacacccttgaaaggtctgctagtatcgaaa
gatttctcttataccctactagatcctaaggacctgaaagacttcactggtttgtcgacc
agtactctggtgcagaaacaatctataccgataggtgtggactggagcgtaatcagatgg
catctagaagggatgtatggagaagttgaggaaggcacggacgaagagggacgacctagc
ttcacgatcatgaatgctgtcaaggtagtgcagatatcggagatcgtagttgagatacag
tggtcgtctaattcgagtaacgatatgattgcggattctgctttggcggtattattgggt
atagatggaagtccagctacagtgaaattgacgtcaacaccgcatcagcattctcatcac
gatcattcgcacgaaaaaggagattcgatgatgaataaacattcccatgttgacgctagt
ggaaacgatgagttcgacaggatacggatgttcctcgaagctcatttcggtgaggtttcc
ggaccgaacgtgacagttgcagagggcgaggaggatgagttgttagtgatgacggtcaag
attgatgaggtcatggctaaggttgacctgatttcaatgcgtgtcgaatcggattcgcct
gatctgaagagaagggtggaaactgtacttgaaatggctctgacgactttgaaaccatta
tcaaggtcgtttatcggatcgggtatggacttgaatctggagaacatcgctgtcaccgca
tag
DBGET
integrated database retrieval system
