Kwoniella europaea: 91107304
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Entry
91107304 CDS
T10999
Symbol
V865_008503
Name
(RefSeq) mRNA 3'-end-processing protein YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ker Kwoniella europaea
Pathway
ker03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ker00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91107304 (V865_008503)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ker03021
]
91107304 (V865_008503)
03019 Messenger RNA biogenesis [BR:
ker03019
]
91107304 (V865_008503)
Transcription machinery [BR:
ker03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91107304 (V865_008503)
Messenger RNA biogenesis [BR:
ker03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
91107304 (V865_008503)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_4
zf-CCHC_2
zf-CCCH_2
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
91107304
NCBI-ProteinID:
XP_066088335
UniProt:
A0AAX4KX69
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All DBs
Position
3:complement(join(1741200..1741289,1741445..1741829,1741931..1742378,1742476..1742617))
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AA seq
354 aa
AA seq
DB search
MAAAASSSTPLDPHLGRAADFVRPDFHQVNLDIEGFLKTQKGYKLDADTQICPLSLTPLG
CPLPPSQCPYRHTNPSPANFQPPPPLPPHPREREKKLTVCKHYLRNLCKMGDNCEYTHDW
NLRTMPVCVMFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCLLGPECPRKHIRKRLCG
AYQSGFCPDGEKCKLSHPPADRPKPEEYINPIPPDPTQFTGPPPQLPAGYGRWREYKYDP
NAVVVPAPAWVEGGSLSGWRAGGFLSGNARRNEDRDGHGHGHGGHGGHGGRSFDNRDNRD
VPQNAPAGYEKKTGWVKDLSTVLCFRCNQYGHFANTCPNQAVPGDRGGLKRERD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcagccagttcgtcaacacctcttgaccctcatttgggcagagcagcagat
ttcgttcgaccagatttccatcaggtcaacttggatatagagggatttctaaagactcaa
aaaggatataaacttgatgctgatacccagatatgtcctttatccctaacacctctcgga
tgtccccttccaccttcacaatgtccctatcgtcataccaatccctctccagcaaatttc
caaccaccacctcctctccctccccaccctagagaacgggaaaagaaattaacagtgtgt
aaacattacctccgaaatctatgtaagatgggagataattgcgaatacacacatgattgg
aatctacgtacgatgcctgtctgcgtgatgtttgtgaaacaagggaaatgtgaattgggt
ggtgaatgtttgtattttcaccctagagatagaagagttgaatgtccagattataacaga
ggtttttgtttattgggaccggaatgtccaagaaaacatattaggaagaggttgtgtgga
gcttatcagagtgggttttgtcctgatggagagaaatgtaaactatcacatcccccagca
gaccgacctaaacctgaagaatatataaaccccatccctcccgaccctactcaattcacc
ggtccaccaccccaattaccagcgggatacggtcgatggagggaatacaaatacgatcct
aacgctgtggttgtacccgcgcctgcatgggtcgaaggtggttctctcagtggatggaga
gcaggtggtttcttgtctggtaatgcaaggaggaatgaagatcgagatggacatggtcac
ggacatggcggacatggtggacatggtggtagatcatttgataatagggataatagggac
gtgccacaaaacgctccggcagggtatgagaagaaaactggttgggtcaaggatctaagt
acggtattgtgttttagatgcaaccaatatggtcatttcgcaaatacatgtccgaaccaa
gctgtcccaggtgatagaggtggattgaagagggagagggattag
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integrated database retrieval system
