Komagataeibacter europaeus: S101446_01313
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Entry
S101446_01313 CDS
T04893
Name
(GenBank) Ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
keu
Komagataeibacter europaeus
Pathway
keu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
keu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S101446_01313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
keu03019
]
S101446_01313
Messenger RNA biogenesis [BR:
keu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
S101446_01313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
ARW16443
LinkDB
All DBs
Position
complement(1427106..1428749)
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AA seq
547 aa
AA seq
DB search
MNDMTGVSFLPLGGTGEIGMNLNLYRQGEAWLAVDCGIGFSGNDTPEAEIILPDPVFIAE
RRDRLTGLVVTHAHEDHLGAIAHLWPQLGCPVYVTPFAAAVLRRKLGEAGLLQQVPIHVI
APGSAFTVGPFDLRFVSVTHSVPESQSLVLRTPQGIIVHTGDWKIDPDPQVGPPTDLETF
AELGREGVLAMVCDSTNVRTEGPSASEADVRREMTRLIASLEGRIAVTCFASNVARVETL
AMAAKAAGRRVAVVGRSLRNLEVAARECGYLSDVPHFLSEQDANSIPDSQILLIVTGSQG
EPRSALSRIAADTHPNIALGEGDTVIYSSRMIPGNEQAVIQVQDSLTRRGVHVITDKDHL
VHVSGHATGGDVRKLYDLVRPRFLIPVHGEWRHLTANAAIAQELNIEPVLLEDGDILDIR
ADGVEIGDTAPTGRLVLDGGRILPMNGGVLSARRRMLFNGMVLGSFAVDDEGYLIGDPKV
SAPGLLDAEDPETQRVTEEFGNALDEIPDELRENDATFREAAKTALRRALGRKLQKRPLV
DVHLLRV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatatgacaggcgtttcattcctcccgttaggcggaacaggcgaaattggcatg
aacctcaacctgtaccgacagggtgaggcgtggctggcggtggattgcggcatcggcttc
agcggcaatgacacgccggaggcggaaatcatcctgcctgatccggttttcatcgccgaa
cgcagggacaggctgaccggtctggtcgtcacccacgcgcatgaagaccacctgggggcg
atcgcccatctgtggccgcagcttggctgcccggtctatgtcacgccgtttgccgcggca
gtgctgcgccgcaagctgggggaggcagggctgctgcagcaggtgcccatccatgtgatc
gcccccggcagcgcctttaccgtcgggccgtttgacctgcgcttcgtctcggtcacgcat
tcggtgccggaatcacagtcgctggtgctgcgcacgccgcagggcatcattgtccatacc
ggggactggaagatcgatcccgacccgcaggtcggaccgccgaccgaccttgaaaccttc
gccgaactggggcgtgagggcgtgctggccatggtgtgcgacagcaccaatgtccgcacc
gaagggccgtccgcgtccgaagccgatgtgcggcgcgagatgacgcgcctcatcgcctcg
ctcgaggggcggatcgcggtgacctgcttcgccagtaacgttgcccgcgtggaaacgctg
gccatggcggcaaaggccgctggccgccgcgttgccgtggtcgggcgcagcctgcgcaac
cttgaggtcgcggcgcgcgaatgcggctacctgtcggatgtgccgcacttcctgtcggaa
caggacgccaattccattcccgacagccagatcctgctgatcgtgaccggcagccagggc
gagccccgttcggccctgtcgcgcatcgcggccgacacccaccccaacatcgcgctgggt
gagggggatacggtcatctacagcagccgcatgattcccggtaacgagcaggccgtgatc
caggtgcaggacagcctgacccgccgtggcgtgcatgtcattaccgacaaggaccacctt
gtgcatgtatcaggccacgccacgggtggtgacgtgcgcaagctgtatgaccttgtgcgc
ccgcgtttcctgatcccggtgcatggcgaatggcgtcacctgaccgccaatgccgccatt
gcgcaggaactgaatatcgaacccgtgctgctggaagatggcgatatcctcgacatccgc
gccgacggggtcgagatcggcgataccgcccccaccgggcgtctggtgctggatggcggg
cgcatcctgcccatgaatggcggcgtactgtcggcgcggcgccggatgctgttcaacggc
atggtgctgggcagcttcgcggtggatgatgagggctacctgatcggtgacccgaaggtc
agcgcgcccggcctgctggatgccgaagaccccgaaacccagcgcgtgaccgaggaattc
ggcaatgcgctggatgaaatccccgatgaactgcgtgaaaacgacgcgaccttccgcgaa
gcggccaagacagcgctgcgccgcgcgctgggtcgcaagctgcagaagcgcccgctggtc
gatgtgcatctgctgcgggtgtag
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