Komagataeibacter europaeus: S101446_01530
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Entry
S101446_01530 CDS
T04893
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
keu
Komagataeibacter europaeus
Pathway
keu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
keu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S101446_01530 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
keu03021
]
S101446_01530 (rpoB)
03400 DNA repair and recombination proteins [BR:
keu03400
]
S101446_01530 (rpoB)
Enzymes [BR:
keu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
S101446_01530 (rpoB)
Transcription machinery [BR:
keu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S101446_01530 (rpoB)
DNA repair and recombination proteins [BR:
keu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S101446_01530 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DUF6218
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
ARW16656
UniProt:
A0A0M0EM24
LinkDB
All DBs
Position
complement(1646309..1650481)
Genome browser
AA seq
1390 aa
AA seq
DB search
MNAITKSFTGRKRIRKSFGHIPEVAPMPNLIDVQRASYETFLQMNVAPDSRTPTGLQEVF
RSVFPINDFAGRGRLEFVSYELEEPKYDVEECIQRGLTFAAPLKVILRLIVWDVDEDTGS
RSIRDIKEQPVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKFL
FAARVIPYRGSWLDFEFDSKDLIYVRIDRKRKLPVTTLLYALEGAASEAARAAKAAEGGD
VESMEIRGMDPDEILSYFYGKVEFTKTEKGWARRFDADSFRGMKLLEPLIDAQTGEEVAP
VDAKLTARMVRKIAETTKEVLVGPAGLIGRFIASDIVNEHTGEIFAEAGDELTEQKLEEL
EEAGLTTLSTLAVDAANGPWIRNTLAVDKNASRDEALTDIYRVMRPGEPPTPETAEAMFS
GLFFDPDRYDLSAVGRVKMNMRLGVDVPDTVRVLRKEDILRTVKIMCELKDGRGAIDDID
NLGNRRVRSVGELMENQYRVGLLRMERAIRERMGSVDIDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLATYAKVNKYGFIETPYRMVEDGVLQDGWKYLSAMEEEKLVVAQADAKQDAQ
GHLTDDLVSVRRGGDFRQVPPTDVTACDVSPKQLVSVAAALIPFLENDDANRALMGSNMQ
RQAVPLVRSDAPLVGTGMEAAVAHDSGAAIVARRHGVVDQIDGARIVVRATDDAGATQGV
DIYRLRKYMRSNQSTCINQRPLVRVGDQVRAGEIIADGPSTELGELALGRNVLVAFMPWN
GYNFEDSILISERIARDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALRNLDEA
GIVYVGAEVNPGDILIGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLKLPPGTTGTI
VDVRVFSRRGVDKDERAMAIERAEIERLAKDRDDERAIQERSFYNRLREHLIGQTAGTGF
KGIRSGTEITDEVLSEHPRGAWRNITVMSDEVMAELETLRREFDAAVSKIQARFDNKVEK
LQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLEDGTSVD
IVLNPLGVPSRMNVGQILETHLGWACANIGRQVAQLADEYQRHGEKRQELLDELKSVYGD
KVYDEQIGDMTDAQLLELCGNLRKGVPIATPVFDGASIPDIETMLQKAGVDKSGQSQLID
GRTGEPFERKTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVREQDDFEAGIPESFNVLIKELKSLG
LNVDLEQSGS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgattacaaaatcgttcacgggacgcaaacgcatccgcaagagcttcgggcat
atacccgaggtcgctccgatgcccaatctgatcgacgtgcagcgggcaagctacgagacg
ttcctccagatgaatgtggcgcccgacagccggacgccgacgggcctgcaggaagtgttc
cgttccgtctttccgatcaatgatttcgcggggcgcgggcgtctggaattcgtcagctat
gagctggaagaaccgaaatacgacgtcgaggaatgtattcagcgtggcctgacctttgcc
gcgccgctgaaggtgatcctgcgcctgatcgtgtgggacgtggatgaagataccgggtca
cgctcgatccgcgatatcaaggaacagccggtttacatgggcgacatgccgctcatgacc
gataacggcaccttcatcatcaacgggaccgagcgtgtcatcgtcagccagatgcaccgc
agccccggcgtgttcttcgatcatgacaagggcaagacccattcttcgggcaagttcctg
ttcgctgcgcgcgtcattccctatcgcgggtcgtggctcgatttcgaattcgacagcaag
gacctgatctacgtccgcatcgaccgcaagcgcaagctgccggtcaccacgctgctgtac
gccctggaaggcgcggcatccgaagccgcccgcgccgccaaggccgccgagggtggcgac
gtggagtccatggaaatccgtggcatggatcccgacgagatcctgagctacttctatggc
aaggtcgagttcaccaagacggaaaagggctgggcccgccgttttgacgccgattccttc
cgtggcatgaagctgcttgagccgctgatcgatgcccagacgggtgaggaagtcgccccg
gtcgatgcgaagctgaccgcgcgcatggtccgcaagatcgcggaaaccaccaaggaagtg
ctggtcggcccggccgggctgatcgggcgtttcatcgcgtccgacatcgtcaacgaacac
acgggcgagatctttgccgaagccggtgacgaactgaccgagcagaagctggaagaactt
gaggaagctggcctgaccacgctgtccacccttgcggtcgacgcggccaatggcccatgg
atccgcaatacgctggctgtggacaagaacgcctcgcgcgatgaggcgctgaccgacatc
tatcgtgtcatgcgccccggtgagccgccgacgcccgagacggcggaagccatgttctcc
ggcctgttcttcgatcccgaccgttatgacctgtccgccgttggccgcgtgaagatgaac
atgcgccttggcgtggacgtgcccgatacggtgcgcgtcctgcgcaaggaagacatcctg
cgcaccgtcaagatcatgtgcgaactgaaggacggtcgcggcgcgattgacgacatcgac
aaccttggcaaccgtcgcgtgcgttcggttggcgaactgatggaaaaccagtaccgcgtt
ggcctgctgcgcatggagcgcgccatccgcgaacgcatgggttcggtcgatatcgacacg
gtcatgccgcatgacctgatcaacgccaagccggcggcggccgcggtgcgtgagttcttc
ggctcatcccagctcagccagttcatggaccagaccaacccgctgtcggaagtcacgcac
aagcgtcgcctgtccgcactcggcccgggtgggcttacgcgtgagcgtgcgggcttcgaa
gtccgtgacgtgcacccgacgcattatggtcgtatctgcccgatcgagacgccggaaggc
ccgaacatcggcctgatcaactccctcgccacctatgccaaggtgaacaagtacggcttc
atcgaaaccccgtaccgcatggttgaggacggcgttcttcaggatggctggaaatacctt
tccgccatggaagaggaaaagctggtcgttgcccaggcggatgcgaagcaggacgcgcag
ggtcacctgacggacgacctggtttcggtgcgccgtggcggtgacttccgtcaggttccg
ccgaccgacgtgacggcgtgtgacgtctcgcccaagcagcttgtctcggttgccgcggcc
ctcattccgttccttgagaacgatgacgccaaccgcgcgctgatgggctcgaacatgcag
cgtcaggccgtgccgctggtgcgttcggacgcgccgctggtcggcacgggcatggaagct
gccgtggcccatgactcgggtgccgcgatcgtggcccgccgccatggcgtggtggaccag
atcgatggcgcgcgtatcgttgtccgcgcgacggatgatgccggtgcgacgcagggcgtg
gatatctaccgcctgcgcaaatacatgcgttccaaccagtccacctgcatcaaccagcgt
ccgctggtgcgcgtgggtgaccaggtccgcgcgggtgagatcatcgccgatggtccgtcc
accgaactgggtgaactggcgctgggccgtaacgtgctggtcgcgttcatgccctggaac
ggttacaacttcgaagattcgatcctgatttccgaacggatcgcgcgtgatgacgtgttt
acctcgatccatatcgaggaattcgaggtcatggcccgcgacacaaagctgggccaggaa
gaaatcacccgcgacatccccaatgtcggtgaggaagcgctgcgcaaccttgacgaagcc
gggatcgtgtatgtgggcgccgaggtgaaccccggcgatatcctgatcggcaaggtcacg
ccaaagggcgaaagcccgatgacgccggaagaaaagctgttgcgcgccatttttggtgaa
aaggcgtccgatgtccgtgacacctcgctcaagctgccgcccggcacgacgggtaccatc
gtggatgtgcgcgtgttctcccgccgtggcgtggacaaggacgagcgcgcgatggcgatc
gagcgcgccgagatcgaacgcctggccaaggaccgcgacgatgaacgcgccatccaggaa
cgttccttctacaaccgtctgcgcgagcacctgatcggccagacggccggtacgggcttc
aagggcatccgttcaggcaccgagatcacggatgaggttctgtccgagcacccccgtggc
gcatggcgcaacatcaccgtgatgtccgatgaggtcatggcggaactggaaacgctacgt
cgtgaattcgatgccgccgtttccaagattcaggcccgcttcgacaacaaggtcgagaag
ctgcagcgtggtgacgaactgccgccgggcgtgatgaagatggtcaaggtctttgtcgcg
gtgaagcgcaagctgcagccgggtgacaagatggctggccgtcatggcaacaagggtgtc
gtctcccgcgttgtgccggttgaggacatgccgttccttgaggatggcacctcggttgac
atcgtgctgaatccgctcggcgtgccgtcgcgcatgaacgtgggacagatccttgagacc
catctgggctgggcctgcgccaatattggccggcaggtagcccagctggccgatgagtac
cagcgccatggcgaaaagcgccaggaattgcttgatgaactgaagtcggtttatggcgac
aaggtttatgacgagcagatcggcgacatgaccgacgcccagctgctggagctgtgtggc
aacctgcgcaagggcgtgccgattgcaacgccggtgttcgatggcgcgtccatcccggat
atcgagaccatgctgcagaaggcaggcgtggataaatccgggcagtcgcagctgatcgac
gggcgcacgggtgaaccgttcgaacgcaagaccacggtcggttacatctacatgctcaag
ctgcatcatcttgttgatgacaagatccatgcccgttccatcggcccgtactcgctggtg
acccagcagccgctgggcggcaaggcgcagttcggtgggcagcgctttggtgaaatggaa
gtgtgggcgctggaagcttatggcgcggcttacacactgcaggaaatgctgacggtcaaa
tcggatgacgtgtccggtcgtaccaaggtgtatgaagccatcgtgcgcgagcaggatgat
ttcgaagccggtatcccggaaagcttcaacgtcctgatcaaggaactgaagtcccttggc
ctgaatgttgacctggaacagagcggttcctga
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integrated database retrieval system
