Komagataeibacter europaeus: S101446_01699
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Entry
S101446_01699 CDS
T04893
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
keu
Komagataeibacter europaeus
Pathway
keu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
keu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
S101446_01699 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
keu03400
]
S101446_01699 (sbcB)
Enzymes [BR:
keu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
S101446_01699 (sbcB)
DNA repair and recombination proteins [BR:
keu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
S101446_01699 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
S101446_01699 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
S101446_01699 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoI_C
Motif
Other DBs
NCBI-ProteinID:
ARW16825
LinkDB
All DBs
Position
complement(1842712..1844070)
Genome browser
AA seq
452 aa
AA seq
DB search
MSNFIFYDLETTGTNIVFDQIMQFGAVLTDRNLVELDRFEIRCRLLPWIVPAPGALLVTD
TDVRLLDDPTLPDFYSMMRAIAQQLNAWGRATFVGYNSIPFDEPFLQRAFWQALLPPYVT
VTGGNSRLDLLVILRAASTFRSSVLIVPHRDDGMPTYRLDVLAPFNGFNAHHAHDAMGDV
EATLFLARKLKTGFSELWEKLSGRASKSVISSLLDAGEPLFLFHHGAKPSLSCYYRVDDG
RLRSHATLARLSFDWKGASILSVDNSGAMRQMLRRVALNKAPVVLTLEEAENFASVMPTD
LELAQASFLASDRSYCADLAELLEPLSASPTANGAQVEETIFDGFASNCDAKLMAEFHRA
APPEQLEIAKAFEDVRFRRLAMRILYVQAPQILTLRETRPIDAGIARRLEGEPGGQPWRS
LGDARKELTSCSSKMSSEAKQSISNWLAERAV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttcattttctacgatctcgaaacgaccggaaccaatattgtttttgaccag
ataatgcagtttggtgcggtcttgactgaccgaaatctggtcgaactcgatcgtttcgaa
attcgttgccgacttcttccgtggattgttccggcgccaggtgcgcttctcgttacagat
accgacgttcgtctcctcgatgacccgactttacccgacttttattcaatgatgcgtgcg
atcgctcagcagctcaatgcatggggaagggcaacttttgtaggctacaactcgatacct
tttgatgaacctttcttgcagcgcgctttctggcaggcgttgcttccgccttatgtgact
gtgacaggtggtaattcccgtctcgatctcttggtaattctccgtgctgcctctactttt
cgctctagcgttctaatagtaccgcatcgagatgatgggatgccaacctatcgtttggat
gtgctggccccctttaacgggttcaacgcacatcatgcccatgatgcgatgggtgatgtc
gaagcaacactcttcttagctcggaagttaaaaactggtttttcagaactatgggaaaag
ctaagtggccgggcctctaaatctgtaatttcatcgttattggatgctggcgaaccgcta
tttctcttccatcatggtgctaagccctcgttgtcttgttactatcgagtggacgacggt
cggctgcgttcgcatgcaacattagccagactttcattcgactggaaaggtgcaagcata
ctgtcagtagacaattcaggagctatgcgtcaaatgcttcgccgtgtcgcacttaacaag
gctccagttgttttaacgcttgaggaagccgaaaattttgcgagtgtcatgcccacagac
ttagaactcgcacaggcctctttccttgcaagcgaccgttcttattgcgctgatttagcg
gaactcctagagccgttatcagcttctccaacggcgaatggtgctcaagtcgaggaaacc
atctttgacgggtttgccagtaactgtgacgctaaacttatggccgaatttcacagggcc
gcaccgccggagcaactcgagatcgcaaaagcttttgaggacgttcgcttccgccgtctc
gcgatgcgtatcctctatgtgcaagcgccgcagatattgacactgcgtgagacccggccg
atcgatgcggggattgcaagacgtcttgaaggagaacctggtggccagccttggcgatca
ctaggtgatgcgagaaaggagcttacatcctgctcctctaagatgtcttcggaagctaag
cagagcatttcgaactggctggctgaacgcgctgtttag
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