Komagataeibacter europaeus: S101446_02756
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Entry
S101446_02756 CDS
T04893
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
keu
Komagataeibacter europaeus
Pathway
keu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
keu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S101446_02756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
keu03019
]
S101446_02756
03009 Ribosome biogenesis [BR:
keu03009
]
S101446_02756
Enzymes [BR:
keu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
S101446_02756
Messenger RNA biogenesis [BR:
keu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
S101446_02756
Ribosome biogenesis [BR:
keu03009
]
Prokaryotic type
rRNA processing factors
S101446_02756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ARW17841
LinkDB
All DBs
Position
complement(2960129..2963068)
Genome browser
AA seq
979 aa
AA seq
DB search
MSKRMLIDTTHAEETRVVVMDGNHLEDYDVEAASKKQLKGNIYLAKVIRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPVADREKLLALQEEERRAEEERRARDDEEEDAPAATAEE
GEEPGEDDEPETVGGENDTGDEAQAQRRIARFLRNYKIQEVIRRRQILLVQVVKEERGNK
GAALTTYVSLAGRYCVLMPNSLRGGGVSRKITSVADRRRLRDIITELQIPRGMAMIVRTA
GAQRPRAEIMRDCEYLLRLWDDIRQHTLESVAPALIYEEASLIKRAIRDIYTREVSEILI
DGEPGWKSAREFMRMLMPQNAQKVRLWQDHEQTLFSHYKVEGLLDSMLSPSVQLKSGGYL
VINQTEALVAIDVNSGRATRERNIEETALRTNLEAAEEVARQLRLRDLAGLIVIDFIDME
SRKHNGMVERKLKDALRTDRARIQVGQISHFGLLEMSRQRLRPSIAESAFMPCPHCQGTG
IVRGIESSALHVLRAIEEEGMQRKAAEIAVGVAPEIAFYILNHKRNWLSEIETRHKMQVT
FAPDAALQPQECKIERVRQQTARFDAPVVEQAAAETSHVREIQIQAEPPGAETPAEAVTT
TDEDEDIASGTDHRRRRRRRRRRGAGTQTAQTQATGDTAQEAPAPVAPPAPAPAPEAYRG
PTPADPYGDAIIDIFDVIEQTTAPSEVVVEADPVVVEVEEAAPAPVAEEETTKPRRTRRR
TRRRTTPVENEATPVAQEAEATPAPVAEATPPAVEVEAEPEAAPAPAEPAAEEAPKPRRR
RASTTTTRRTSTRRKAADEAVEAETPAKAAEAEPAEEKATEEAAPAKPARKRAASRSTGT
TATTRRRTTRTAAKAADKVEEPAVETPATPTEAEAPATEEAPKRRRTTRRKKAEPAPEAE
AAQTVAETADAAAEKAEKPTPKKRTTTRKTATTTTATRRRRKKADEEAETTGTTADAAPT
PIDVDAAPATRRRTGWWKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgcatgctgatcgacacgacccacgcggaagaaacccgcgtggtcgtgatg
gatggtaaccacctggaagattacgatgttgaagctgcatccaagaagcagctcaagggc
aacatctatctggccaaggttatccgcgtggaacccagcctgcaggctgcgttcgtggat
tatggcggcaaccgccacgggttcctggccttcagtgaaatccaccccgattattaccag
atccccgtagccgaccgcgaaaagctgctggcgctgcaggaagaggaacgccgcgcggaa
gaagaacgccgcgcgcgtgacgacgaggaagaggacgcccccgccgccaccgccgaggaa
ggcgaggaacccggcgaggacgacgagcccgaaaccgtgggcggcgaaaacgacaccggc
gacgaagcgcaggcccagcgccgcatcgcgcgcttcctgcgcaactacaagatccaggaa
gtcatccgccgccgccagatcctgctggtgcaggtggtcaaggaagaacgcggcaacaag
ggcgctgcgctgaccacatatgtctcgctggccggtcgctattgcgtgctcatgcccaac
tcgctgcgtggcgggggggtttcgcgcaagatcacctcggtggccgaccgccgccgcctg
cgtgacatcattaccgaactgcagatcccgcgcggcatggccatgatcgtgcgcaccgcc
ggcgcccagcgcccgcgcgccgaaatcatgcgagactgcgaatacctgctgcgcctgtgg
gacgacatccgccagcacacgctggaatcggtggcccccgccctgatctatgaagaagcc
agcctgatcaagcgcgccatccgcgacatctacacgcgtgaggtcagcgagatcctgatc
gatggcgagccgggctggaagtccgcgcgtgagttcatgcgcatgctcatgccgcagaac
gcgcagaaggtgcggctgtggcaggatcatgaacagaccctgttctcccactacaaggtg
gagggacttctggattccatgctgtcgccgtccgtgcagctgaaatcgggtggctacctg
gtcatcaaccagaccgaggcgctggtcgcgatcgacgtgaactcgggccgcgccacgcgt
gagcgcaatatcgaggaaacggcgctgcgcaccaacctcgaagcggccgaggaagtcgcc
cgccagctgcgcctgcgtgaccttgccgggctgatcgtcatcgacttcatcgacatggaa
agccgcaagcacaacggcatggtcgagcgcaagctgaaggacgcgctgcgcactgaccgc
gcgcgcattcaggtgggccagatctcgcatttcggcctgctggaaatgtcgcgccagcgc
ctgcgtccctccattgccgaatccgccttcatgccctgcccgcactgtcagggcaccggc
atcgtgcgcgggatcgaaagctcggcgctgcacgtactgcgcgcaatcgaggaagagggc
atgcagcgcaaggcggcggagatcgccgtaggcgtcgcgccggaaatcgccttctatatc
ctcaaccacaagcgcaactggctgtcggaaatcgaaacccggcacaagatgcaggtcacc
ttcgcccccgatgccgccctgcagccgcaggaatgcaagatcgagcgcgtgcgccagcag
acggcccgcttcgatgcgccggtggtcgaacaggctgcggctgaaaccagccatgtgcgt
gaaatccagatccaggccgaaccgccaggggcggaaaccccggccgaagccgtcacgacc
acggatgaggacgaggatatcgcctcaggcaccgaccatcgtcgccgtcgccgtcgccgc
cgccgtcgtggcgccggcacacagaccgcccagacgcaggcaaccggggatacggcacag
gaagcccccgcaccggtcgcgcctcccgcgcccgccccggctcctgaagcctatcgtggc
cccaccccggctgatccgtatggcgatgcgatcatcgacatctttgacgtgatcgagcag
acgaccgcacccagcgaagtggttgtggaagctgatccggtggtggtcgaagtggaagaa
gccgccccggccccggttgccgaggaagaaaccaccaagccacgccgcacgcgtcgccgt
acgcgccgtcgtaccaccccggtggaaaacgaggcgacgccggtcgcacaggaagccgag
gcaacccccgccccggttgccgaggccaccccgcctgccgtggaagtggaagccgaaccc
gaagctgctcccgcacctgcggaaccggcagcggaagaagcgcccaagccacgccgccgt
cgtgccagcacgaccaccacgcgccgcaccagcacccgccgcaaggccgctgatgaggcc
gtagaggcggaaaccccggccaaggcagccgaggcggaaccggcggaagaaaaggcaacc
gaggaagccgcccccgccaagcccgcgcgcaagcgtgcggccagccgcagcacgggcacg
accgccaccacgcgtcgccgcaccacccgcacggcggcaaaggctgcggacaaggtcgag
gaaccggcagtggaaacgcctgccaccccgaccgaagccgaagccccggccacggaagaa
gcccccaagcgccgccgcaccacgcgccgcaagaaggctgaacccgcgccggaagcggaa
gctgcgcaaaccgtagccgaaacagcggacgccgcagcggaaaaggctgaaaagcctacc
ccgaaaaagcggaccacaacccgcaagacggccacgaccacgacggcaacccgtcgccgc
cgcaagaaggccgatgaggaggctgaaaccacgggcaccacggcagatgccgcgccgacc
ccgatcgacgtggacgccgcaccagccacacgccgtcgcacgggatggtggaagcgctga
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