Kaistella flava (ex Peng et al. 2021): Q73A0000_09170
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Entry
Q73A0000_09170 CDS
T08317
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
kfa
Kaistella flava (ex Peng et al. 2021)
Pathway
kfa02020
Two-component system
kfa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q73A0000_09170 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q73A0000_09170 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kfa03021
]
Q73A0000_09170 (rpoN)
Transcription machinery [BR:
kfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q73A0000_09170 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Med9
FtsX_ECD
Motif
Other DBs
NCBI-ProteinID:
QOW10527
UniProt:
A0A7M2Y8E0
LinkDB
All DBs
Position
complement(2037215..2038693)
Genome browser
AA seq
492 aa
AA seq
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MLKQNLQMRLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKVQEDNKEEEYSS
LDEKFEEEGNESIDTDFDVNEYIFDDEPAYKSSANNYSADDEEFDNQSLLTEGQSLYDYL
LEQIYLAKVDDDDLKIAEYIIGNLDNDGYLRREVKQLVDDLAFSQGMITTTEKVTEILEN
YVQKLDPPGVGARGLQECLLLQIEKKVSADKAVSLAGNILRNQFDALTNKHYNKIIQKYD
IEEEDLKDALEVISKLSPKVGGNFDTQTITINNEIIPDFLITIKDNGAKGVDVIPSLNSK
NAPSLRVSDEYKDILTTYSHDKKSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTIS
AIVQLQKEYFITADDKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKSLFS
DSLTNDDGEEVSTKEIKTHLMDIIDSENKRKPHTDDALVGLLKEKGYNIARRTIAKYREQ
LNIPVARLRKEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaaaatcttcaaatgagactcggccagaaattggccccgcaacaaattcag
ttgatgaaattgattcaacttcataccctcgaatttgaggaggaattagagcgcgaactg
gaagaaaatcctgctttagaaaaagtgcaggaagataataaagaagaagaatattcctca
ctcgacgaaaaatttgaagaagaaggcaacgaaagtatcgacactgattttgatgttaac
gaatatatttttgatgacgaaccagcttacaaatcttcagcgaataattattctgcggac
gatgaagagtttgataatcagtcgcttttaacagaagggcaatccttgtacgattacctt
ttggaacaaatatatttggctaaagttgatgatgatgatttgaaaattgcagaatatatt
atcggaaatcttgataatgacggttatcttcgcagagaagtgaaacagttggttgatgat
ttggcattctcgcaaggaatgattacgactactgaaaaggtaactgaaatcttagaaaac
tacgttcagaaattagatccgccgggagttggtgccagaggtttacaagaatgtctttta
ctacaaatcgagaaaaaagtaagtgccgataaagcagtaagtttagccggaaatattttg
agaaatcagtttgatgctttgacgaataagcattacaacaagattattcagaaatatgat
atcgaagaagaagatttaaaagatgctttggaagtgatttcgaaattatcgccgaaagtt
ggtgggaatttcgatacgcaaacgattaccattaataatgaaattattccggatttctta
attaccattaaagataatggtgcaaaaggagtagatgtaattccttcgttaaatagtaaa
aacgctccatctttgagagtttcagatgaatataaagatattttaacgacctattctcac
gataaaaaatctgcagaacataaacaggcagcactttttataaagcaaaaattagatgcg
gcaaaatggtatattgatgcgattaatcagcgtcagaatactttgctacaaacgatttct
gccattgttcaattgcaaaaagaatacttcattacagctgatgacaaatcattgaaaccg
atgattttgaaagacgttgcagatattacgggatttgatatttctacaatttcccgtgtg
gtaaaaagcaaatatgctgatacgccaaacggaattgtttatttgaaaagcctattctcg
gattcattaaccaatgatgacggtgaagaagtttctaccaaagaaatcaaaacccatttg
atggatattattgatagtgagaacaagagaaagccacataccgacgatgctttagttgga
cttttgaaagaaaaaggatacaatattgccagacgtacgattgcgaaataccgtgagcaa
ctcaatattccagtggcgcgtttaagaaaagaattgtag
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