Kribbella flavida: Kfla_0581
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Entry
Kfla_0581 CDS
T01155
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kfl
Kribbella flavida
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kfl03032
]
Kfla_0581
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_0581
Enzymes [BR:
kfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Kfla_0581
DNA replication proteins [BR:
kfl03032
]
Prokaryotic type
DNA Topoisomerases
Kfla_0581
DNA repair and recombination proteins [BR:
kfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Kfla_0581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ADB29702
UniProt:
D2PW45
LinkDB
All DBs
Position
605825..608596
Genome browser
AA seq
923 aa
AA seq
DB search
MAGATGTKSAAGAPAAAAGRRLVIVESPKKARMIAGFLGSGYVVESSFGHIRDLPKGADE
IPAKYKGLPWARLGVNIDDHFDPLYVVPADKKAQIRKLKDLLKDADELYLATDEDREGEA
IAWHLLDELKPKVPVKRMVFHEITPKAIQDAVGSARQINDALVDAQEARRILDRLYGYEV
SPVLWKKVMPKLSAGRVQSVAIRMVVDRERERIAFRSASYWDLDATLDAGEGKTPRLFPS
RLVSVDSRRVAQGRDFAPTGELKSQNTVHLDEPTATALAAALAESRFTVRSIESKPYTRK
PYAPFRTTTLQQEAGRKLGMSASQTMQIAQRLYENGNITYMRTDSVTLSDTAITAARAQV
RELYGASYLPDKPRVYTSKVKNAQEAHEAIRPAGEVFQTPAQTGLSGPEYRLYELIWMRT
IASQMKDAAGNSVSIKIDATASTGENCEFTSSGRVITFHGFLKAYVEGADDPSHETDDRE
TQIPDVAEGDVLPATEVLASGHETKPPSRFTEATLIAQLEEREIGRPSTYASILGTIQAR
GYVYKKGNALVPAWLAFAVVRLLEQHFTRLVDYAFTASMEDVLDDVAAGNLQREGVLGRF
YFGDDDLEGLQSMVSDLGDIDAREMSTFGVGPPDSGIVVRVGRYGPYVEGPDETRANVPE
DLPPDELTVDKAKELLSQPSGVEVELGTTPDTGLKVIAKAGRYGPYVTEVLPEGAPKSAK
PRTGSLLKSMSLDTVTLDDALKLLSLPRVVGKDPESGDEITAQNGRYGPYLKKGTDSRSL
QSEEQMFDITLDEALKIYAEPKQRGRRAAAPPLKELGEDPESGKPVVVKEGRFGPYVTDG
ETNATLRKDDSVDTISLLRAAELLADKRARGPVKKTAKKAPAKKTAAKKTTAKKATAKKT
AATGATKKTAAKKTTKKAAAKKS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggggcaacaggaaccaagagtgcggccggcgcgccggccgcggcggccggtcgc
cggctggtgatcgtcgagtcgccgaagaaggcgcggatgatcgccggtttcctggggtcc
gggtacgtggtggagtcgagcttcggccacatccgggacctgccgaagggggccgacgag
atccccgcgaagtacaaggggctgccgtgggcccggctcggcgtcaacatcgacgaccac
ttcgacccgctgtacgtcgtaccggccgacaagaaggcacagatccgcaagctcaaggac
ctgctgaaggacgccgacgagctctacctggccaccgatgaggaccgcgagggcgaggcg
atcgcctggcacctgctggacgagctgaagccgaaggtcccggtcaagcggatggtcttc
cacgagatcaccccgaaggcgatccaggacgcggtcggcagcgcccgccagatcaacgac
gcgctggtcgacgcccaggaggctcggcggatcctcgaccggctgtacggctacgaggtc
tcgccggtgctgtggaagaaggtcatgccgaagctgtcggcgggccgggtccagtcggtc
gcgatccggatggtggtcgaccgcgagcgggagcggatcgcgttccgcagcgcctcgtac
tgggacctggacgccaccctggacgccggtgagggcaagacgccccggctgttcccgtcc
cggctggtctcggtggacagccgccgggtcgcccagggccgcgacttcgcgccgaccggg
gaactgaagagccagaacacggtccacctggacgagccgaccgcgaccgcgctggccgcc
gcgctggccgagtcgcgcttcaccgtccgctcgatcgagtccaagccgtacacccgcaag
ccgtacgcgccgttccggaccaccacgctgcagcaggaggccggccgcaagctcggcatg
tccgcatcgcagacgatgcagatcgcccagcggctgtacgagaacggcaacatcacctac
atgcggaccgactcggtcacgctgtcggacaccgcgatcaccgcggcccgggcgcaggtc
cgcgagctgtacggcgcgtcgtacctgccggacaagccgcgggtctacacctccaaggtg
aaaaacgcgcaggaggcgcacgaggcgatccggccggccggcgaggtcttccagaccccg
gcgcagaccgggctgtccggcccggagtaccggctctacgagctgatctggatgcgcacc
atcgcgtcccagatgaaggacgcggccggcaacagcgtctcgatcaagatcgacgccacg
gcctcgaccggggagaactgcgagttcacctcgtccggccgggtgatcaccttccacggc
ttcctgaaggcctacgtcgagggcgcggacgacccgtcgcacgagaccgacgaccgggag
acccagatccccgacgtggccgagggcgacgtgctgccggccaccgaggtgctggcgtcc
gggcacgagaccaagccgccgtcgagattcaccgaggcgacgctgatcgcgcagctggaa
gagcgcgagatcggccggccgtcgacgtacgcctcgatcctgggcacgatccaggcccgc
ggctacgtgtacaagaagggcaacgcgctggttccggcgtggctggccttcgcggtggtc
cggctgctggagcagcacttcacccggctggtggactacgcgttcaccgcgtcgatggag
gacgtgctggacgacgtcgcggccggcaacctgcagcgcgagggcgtgctcggccggttc
tacttcggcgacgacgacctcgagggcctgcagtcgatggtcagcgaccttggcgacatt
gacgcccgggagatgtccaccttcggagtcggcccgccggacagcggcatcgtggtccgg
gtcggccgctacggcccgtacgtcgagggcccggacgagacccgcgcgaacgtgccggag
gacctgccgccggacgagctcaccgtcgacaaggccaaggagctgctcagccagccctcc
ggcgtcgaggtcgagctcggtaccacgcccgacaccgggctcaaggtgatcgcgaaggcc
ggccggtacgggccgtacgtgaccgaggtgctgcccgagggcgcgccgaagagcgccaag
ccgcggaccgggtcgctgctcaagtcgatgtcgctggacacggtgacgctcgacgacgcg
ctgaagctgctgtcgctgccgcgggtggtcggcaaggacccggagtccggtgacgagatc
accgcgcagaacgggcgctacgggccgtacctgaagaagggcacggactcgcggtcgctg
cagtccgaggagcagatgttcgacatcacgctcgacgaagcgctgaagatctacgccgag
cccaagcagcgcggccgccgggccgcggcgccgccgctgaaggagctgggcgaggacccg
gagtccggcaagccggtggtggtgaaggaaggccgcttcggcccgtacgtcaccgacggg
gagaccaacgcgacgctgcgcaaggacgactcggtggacaccatctcgctgctgcgggcg
gcggagctgctggccgacaagcgggcccgcgggccggtgaagaagaccgcgaagaaggcg
ccggcgaagaagaccgcggcgaagaagaccacggccaagaaggcgaccgcgaagaagacg
gccgccaccggcgcgacgaagaagacggcggccaagaagaccaccaagaaggccgctgcc
aagaagtcctga
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