Kribbella flavida: Kfla_0905
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Entry
Kfla_0905 CDS
T01155
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kfl
Kribbella flavida
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kfl03032
]
Kfla_0905
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_0905
Enzymes [BR:
kfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Kfla_0905
DNA replication proteins [BR:
kfl03032
]
Prokaryotic type
DNA Topoisomerases
Kfla_0905
DNA repair and recombination proteins [BR:
kfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Kfla_0905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
UBA_3
Motif
Other DBs
NCBI-ProteinID:
ADB30010
UniProt:
D2Q012
LinkDB
All DBs
Position
967149..968162
Genome browser
AA seq
337 aa
AA seq
DB search
MRLRRSTPDKPGLTRRRRGKGFTYLDTERKRITDPDVIERIRTLAIPPAWKDVWICPYPN
GHIQAIGTDEAGRRQYLYHDDWRTSQDADKHDRVRRLARKLPAFREAVDQDLCRQGFGRD
KVLAVALRMLDYGVFRTGNTQYAEEYGSRGASTLLRDDVKVSKGRLVFDFVAKGGIRRTL
ELEDDRLVAAVRSLKRARHDSPRLLVYRDDAGYHEIDATMVNERFHELVGDDYTVKDLRT
WTATVHAAVDLAQADPPRTKKALNEAVKEMLAEVSEHLGNTPTVARASYVDPRVVEQYER
GRTIASTVEKVGDDLDDAGVRAQVERSVNKLLDQDAR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcgccgtagtactcccgacaagcccggcctgacccggcgccgccggggcaag
gggttcacctacctcgacaccgagcgcaaacggatcaccgatccggacgtgatcgagcgg
atccgtacgctggcgatcccgccggcctggaaggacgtctggatctgcccgtaccccaac
ggccacatccaggccatcggcaccgacgaggccggccggcgccagtacctgtaccacgac
gactggcgtacctcccaggacgcggacaagcacgaccgggtccgccggctggcccgcaag
ctgccggccttccgggaggctgtggaccaggacctgtgccggcaggggttcggccgcgac
aaggtgctggcggtggcgctgcggatgctggactacggggtcttccggaccggcaacacc
cagtacgccgaggagtacggcagccggggcgcgtccaccctgctgcgcgacgacgtcaag
gtgagcaagggccggctggtgttcgacttcgtcgcgaagggcgggatccgccgcacgctg
gaactggaggacgaccggctggtggcggccgtccgctcgctcaagcgggcccggcacgac
tccccgcggctgctggtctaccgtgacgacgcgggctaccacgagatcgacgccaccatg
gtgaacgagcgcttccacgagctcgtcggcgacgactacacggtcaaggacctgcggacc
tggaccgccaccgtgcacgcggcggtcgacctggcccaggccgatccgccgcggacgaag
aaggcgctgaacgaggcggtcaaggagatgctcgcggaggtctccgagcacctcggcaac
acccccactgtcgcccgcgcctcgtacgtcgacccgcgcgtggtcgagcagtacgaacgt
ggccggacgatcgcgagcacggtcgagaaggtcggcgacgacctggacgacgccggggtg
cgggcccaggtcgagcgctcggtcaacaagttgctcgaccaggacgcccggtag
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