Kribbella flavida: Kfla_2953
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Entry
Kfla_2953 CDS
T01155
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kfl
Kribbella flavida
Pathway
kfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kfla_2953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kfl03019
]
Kfla_2953
03016 Transfer RNA biogenesis [BR:
kfl03016
]
Kfla_2953
Enzymes [BR:
kfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Kfla_2953
Messenger RNA biogenesis [BR:
kfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Kfla_2953
Transfer RNA biogenesis [BR:
kfl03016
]
Prokaryotic type
tRNA degradation factors
Kfla_2953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ADB32018
UniProt:
D2Q1M9
LinkDB
All DBs
Position
3138118..3140370
Genome browser
AA seq
750 aa
AA seq
DB search
MSGSTNAPMEGADYAEAVIDNGSFGTRTIRFETGRLAQQAAGSAAAYLDGDTMVLSATTA
SKKPKDQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEEAILTCRLIDRPLRPSFVSG
LRNEIQVVITVLALNPDKLYDVLAINAASMSTQIAGLPFSGPIGATRVALIDKQWVAFPT
HSELEDAVFDMVVAGRVTDSGDVAIMMVEAESTPGTFDAVAAGKQAPTEEIVAEGLEAAK
GFIKTLVEAQSALAAKASKPTGEFPIFPDYADDAFAAVQAAATEELTQALTITGKQEREE
ATEAVKAAVVDKLAADFEGREKELSAAFRSLTKKLVRQRVLRDKVRMDGRGLADIRPLKA
QVKVLPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPETRKRYMHNYNFPPYSTGE
TGRVGSPKRREIGHGALAERALVPVLPSREDFPYALRQVSEALGSNGSTSMGSVCASTLS
LLSAGVPLKAPVAGIAMGLISGEVDGKTEYVALTDILGAEDAFGDMDFKVAGTKDFVTAL
QLDTKLDGIPASVLAGALTQAKEARLTILDVMAKAIDAPGEMSEFAPRVISVKVPVDKIG
EVIGPKGKMINQITEDTGADISIEDDGTVYIGATDGPSAEAARAAINAIANPTMPEKGER
YLGTVVKTTNFGAFISLLPGKDGLLHISKLRGLAGGKRVEAVEDILSVGQKLQVEIAEID
DRGKLSLIPVVEGEDGGSDKADESEAAPAE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgggatccaccaacgcgcccatggagggcgcagactacgccgaagccgtgatcgac
aacggcagcttcggcacccgcaccattcgcttcgagacgggccggctggcccagcaggcc
gccggctccgccgccgcctacctcgacggcgacacgatggtgctgtcggccacgacggcc
agcaagaagcccaaggaccagttcgacttcttcccgctgacggtggacgtcgaggagcgg
atgtacgccgcgggccggatccccggctcgttcttccgccgggagggccgtccctccgag
gaggccatcctgacctgccggctgatcgaccgcccgctgcggccgtcgttcgtgtccggc
ctgcgcaacgagatccaggtcgtcatcacggtcctggcgctcaacccggacaagctgtac
gacgtcctggcgatcaacgccgcgtcgatgtccacccagatcgccgggctgccgttctcg
ggcccgatcggcgccacccgcgtcgcgctgatcgacaagcagtgggtcgcgttcccgacc
cacagcgagctcgaggacgccgtgttcgacatggtggtcgcgggccgggtcaccgacagc
ggtgacgtcgcgatcatgatggtcgaggccgagtccaccccgggcaccttcgacgcggtc
gcggccggcaagcaggccccgaccgaggagatcgtcgccgagggcctcgaggccgcgaag
ggcttcatcaagaccctggtcgaggcgcagtccgcgctggccgccaaggcgtcgaagccg
accggcgagttcccgatcttcccggactacgccgacgacgcgttcgccgctgtccaggct
gccgccaccgaagagctcacgcaggcgctgaccatcaccggcaagcaggagcgcgaggaa
gccaccgaggccgtcaaggccgccgtggtggacaagctggccgccgacttcgagggccgc
gagaaggagctgtctgcggcgttccggtcgctgaccaagaagctggtccggcagcgggtg
ctgcgggacaaggtgcgcatggacggccgcgggctggccgacatccggccgctcaaggcg
caggtcaaggtgctgccgcgggtgcacggctcggcgctgttcgagcgcggcgagacccag
atcctcggggtcaccacgctgaacatgctccggatggagcagcagctggacacgctgtcg
ccggagacccgcaagcgctacatgcacaactacaacttcccgccgtactcgaccggtgag
accggccgggtcggttcgccgaagcgtcgcgagatcggtcacggcgcgctcgccgagcgg
gccctggtgccggtgctgccgtcgcgggaggacttcccgtacgcgctgcgtcaggtgtcc
gaggcgctcggctcgaacggctccacctcgatgggttcggtctgcgcctcgacgctgtcg
ctgctgtcggccggtgtgccgctgaaggcgccggtcgcgggcatcgcgatgggcctgatc
tccggtgaggtcgacggcaagaccgagtacgtcgcgctgaccgacatcctgggcgcggag
gacgcgttcggcgacatggacttcaaggtcgccggcaccaaggacttcgtcaccgccctg
cagctggacaccaagctggacggcatcccggccagcgtgctcgccggcgcgctgacccag
gccaaggaagcccgcctcaccatcctggacgtgatggccaaggccatcgacgccccgggt
gagatgagcgagttcgcgccgcgggtcatctcggtgaaggtgccggtcgacaagatcggc
gaggtcatcggccccaagggcaagatgatcaaccagatcaccgaggacaccggtgccgac
atctcgatcgaggacgacggcacggtgtacatcggcgccaccgacggcccctcggccgag
gcggcccgggccgcgatcaacgcgatcgcgaacccgaccatgccggagaagggcgagcgc
tacctgggcacggtcgtgaagacgaccaacttcggtgcgttcatctccctgctgcccggc
aaggacggcctgctgcacatctcgaagctgcgcggcctggccggcggcaagcgggtggag
gcggtcgaggacatcctgtccgtcggccagaagctccaggtcgagatcgccgagatcgac
gaccgcggcaagctgtcgctgatcccggtcgtcgagggtgaggacggcggcagcgacaag
gccgacgagtccgaggccgcgcccgccgagtga
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