Kribbella flavida: Kfla_3944
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Entry
Kfla_3944 CDS
T01155
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kfl
Kribbella flavida
Pathway
kfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Kfla_3944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_3944
Enzymes [BR:
kfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Kfla_3944
DNA repair and recombination proteins [BR:
kfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Kfla_3944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADB32995
UniProt:
D2PR47
LinkDB
All DBs
Position
complement(4221403..4224699)
Genome browser
AA seq
1098 aa
AA seq
DB search
MDAFDLLGPLPTGTTVLEASAGTGKTYALAGLVTRYVAEGAARLDEMLLITFGRAASQEL
RERVRCQLLEAEQALAAPEPWRNDPGLLGHLVDGSAAELAVRHGRLRDALATFDAATIAT
THQFCQLVLRSLGVAGDTDAGVTLVEDLTDLVAEVVDDLYLNLFAGSAEPPPITRATALE
LALKVVGNPHTRLVPEKYAEASPEGVRVEFAKAVLAEVERRKRRLGVLGYDDLLTRLAVA
LEDPTAPARRRMQRRWSVVMVDEFQDTDPVQWKVIDAAFNGHSTLVLIGDPKQAIYAFRG
GDIATYLTAAATAGQRRTLGTNWRSDQPLVDCLQVVLGGARLGHEDIVVHPVDAHHQGSR
LAGAPCDAPFRLRVALRDQFGSAARKNIPMDELRDHITRDLAADIGQLLAAGATYAGRPL
RAGDIAVIVEAHKDARACREALAQAGIPAVYSGDLDIFSSQAAQDWLCLLEAFEQPHRSG
LVRAAATTMFFGETAASLHAGGEELTDRIGQTLRAWADHLRAKGVAAVFEAAQLKGMADR
VLAWRGGERDLTDLAHLAELLHETAHREGFGLPALLDWLRQECTGKGRTTERTRRLDSDV
AAVQIMTVWVSKGLQYPVVYLPFGFNRHIYDEDELLLFHEDGVRSLDIGGRKRAEYRANE
KRWRAEVAGDDIRLTYVALTRAQSQVVAWWAPSWDEVNGGISRLLRGRKQGDPVVPDQLD
RPSSDEEVLVWLRRWQQAGGPVVEQSAIAEHVEPVAEQLPGGLRVATFSREVDLTWRRTS
YSGLVRDAEQQSAGVASEHEESQLADESVDPVPMPAAAAPDALPSPMEGFPVGATFGSLV
HAVLEEADPHAADLHAELAGRIREQLPFWRVDATPDALATAMLPMHATPLGPLVPGLTLR
DLGRGDRLRELDFEIPLAGGDRAAPREVRLAELAPLLRAHLPADDPLLAYADRLEQPLLG
GQSLRGYLTGSIDVVLRVPDGGSHRFVVVDYKTNRLGDPDQPATSAQYGRDQLGAAMLHS
DYPLQALLYSVVLHRYLRWRLPGYAPETHLGGVVYLYLRGMCGPETPVVDGHPAGVFSWS
LPSALVVALSDLLDGRVA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttcgatctgctcggccccctgcccacgggcacgaccgtgctggaagcgagt
gccggcaccggcaagacgtacgccctcgccgggctggtcacccgctacgtcgcggagggc
gccgcgcgtctcgacgagatgctgctgatcaccttcggccgcgccgccagtcaggaactg
cgcgaacgggtgcgctgccagctgctcgaagccgagcaggcgctggccgcccccgagccg
tggcgcaacgacccgggcctgctcggccacctcgtcgacggaagcgccgcggagctcgcc
gtacggcatggtcggctgcgggacgcgctggccaccttcgacgccgccaccatcgcgacg
acgcaccagttctgccagctcgtgctgcgttcgctcggcgtggccggtgacaccgatgcg
ggcgtcaccctggtcgaggacctgaccgatctggtcgccgaggtggtcgacgacctctac
ctcaacctcttcgccggctcggcggaaccgccgccgatcacccgggcgacggcactcgag
ctcgcgctcaaggtggtcggcaacccgcacacccggctggtgccggagaagtacgcggag
gcttcgccggagggcgttcgggtcgagttcgccaaggcggtgctggccgaggtcgagcgc
cgcaaacgccgcctcggcgtcctggggtacgacgacctgctgacccggctggcggtcgcg
ctggaggatcccaccgctccggcccggcgcaggatgcagcgtcgctggtcggtggtgatg
gtcgacgagttccaggacaccgatccggtgcagtggaaggtgatcgatgccgcgttcaac
ggtcacagcacgctggtgctgatcggagaccccaagcaggccatctacgccttccgcggt
ggggacatcgcgacgtacctgacggccgcggcgaccgcggggcagcggcgcaccctcggc
accaactggcgcagcgaccagccgctcgtcgactgcctccaggtggtgctcggcggcgcc
cggctcggccacgaggacatcgtggtccaccccgtcgacgcccatcaccagggcagccgg
ctggccggggcgccgtgcgacgcgccgttccggctccgggtcgcgctccgggaccagttc
ggctcggcggcccgcaagaacatcccgatggacgagctccgcgaccacatcacccgggac
ctcgccgccgacatcggtcagctgctggccgccggcgcgacgtacgccggacggccgttg
cgcgccggcgacatcgcggtgatcgtcgaggcgcacaaggacgcgcgggcctgccgggag
gcgctggcccaggccggtatcccggcggtctactccggcgatctcgacatcttctcgtcg
caggcggcccaggactggctctgcctgctggaagccttcgagcaaccgcaccgctccggg
ctggtccgggccgcggcgacgacgatgttcttcggcgagaccgccgccagtctgcacgcc
ggcggcgaagagctcaccgaccggatcgggcagacactgcgggcgtgggccgaccacttg
cgggcgaagggcgtcgcggcggtcttcgaggccgcgcagctcaagggcatggccgaccgc
gtgctggcctggcgcggtggtgaacgcgacctgaccgacctcgcgcacctggccgagctg
ctgcacgagaccgcccaccgcgaagggttcgggctgcccgcgctgctcgactggctgcgg
caggagtgcaccggcaaggggcggacgacggaacgcacccgccggctcgacagcgacgtc
gcggccgtccagatcatgacggtgtgggtgagcaagggcctgcagtatccggtcgtgtat
ctaccgttcgggttcaaccggcacatctacgacgaggacgagctgctgctgttccacgag
gacggcgtacggagcctggacatcggcggccgcaagcgcgcggagtaccgggcgaacgag
aagcgctggcgggccgaggtcgccggtgacgacatccggctcacctacgtcgcgctgacc
cgggcgcagtcccaggtggtggcctggtgggcgccgtcctgggacgaggtcaacggcggc
atctcccggctgctgcgcggacgcaagcaaggcgatccggtggtgcccgaccagttggac
cggccgtcgtccgacgaggaggtgctggtctggttgcggcgctggcagcaggccggggga
ccggtcgtcgagcagtccgcgatcgccgagcacgtcgagccggtcgccgagcagctgccc
ggtgggctcagagtcgccaccttctcgcgtgaggtcgacctgacctggcgacgtacgtcg
tactcgggtctggtccgggacgccgagcagcagagcgcgggtgtcgccagcgagcacgag
gaaagccagctggcggacgagtccgtggatccggtgccgatgccggccgccgcggcgccg
gacgcgttgccgtctccgatggaaggatttccggtcggcgccacgttcggttcgctggtg
cacgccgtgctggaggaggcggacccgcacgccgccgacctgcacgccgagctcgccggc
cggatccgcgaacagctgccgttctggcgggtcgacgcgactccggacgcactggcgacg
gcgatgctgccgatgcacgccacaccgctcgggccgctggtgcccggcctgacgctgcgc
gacctcggccgcggcgaccggctccgcgagctcgacttcgagatcccgttggcgggcggc
gaccgcgcggcgccccgcgaggtgcggctggccgagctggcccccttgctgcgggcgcac
ctgccggccgacgatccgctgctcgcgtacgccgaccggctcgagcagccgctgctcggc
ggacagagcctgcggggctacctgaccgggtcgatcgacgtcgtgctccgggttcctgac
gggggcagccaccggttcgtggtggtcgactacaagaccaaccggctcggcgatccggac
cagccggccacctccgcgcagtacgggcgggaccagctcggtgccgcgatgctgcactcg
gactacccgttgcaggcactgctctactcggtggtgctgcatcggtacctgcggtggcga
ctgccgggctacgcgcccgaaacgcatctcggcggcgtggtctacctctatctgcgcggc
atgtgtggaccggagaccccggtcgtcgacggccatcctgccggagtgttcagctggtcg
ttgccgtcggcactggtcgtcgcgctgtccgacctgctcgacgggagggtcgcatga
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