Kribbella flavida: Kfla_3945
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Entry
Kfla_3945 CDS
T01155
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
kfl
Kribbella flavida
Pathway
kfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Kfla_3945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_3945
Enzymes [BR:
kfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Kfla_3945
DNA repair and recombination proteins [BR:
kfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Kfla_3945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADB32996
UniProt:
D2PR48
LinkDB
All DBs
Position
complement(4224699..4228007)
Genome browser
AA seq
1102 aa
AA seq
DB search
MTLYLHRAERTDVLADGLGELLATPLADPFAEELVVVPAKGIERWLSQRLAHRLGAAEGS
GDGVCAGVRFTSPRSLVSAVLGLDQDDPWAADAMAWPLLAVLDESLDDAWCEPVARHLGQ
FDSGAEAELRRGRRYAVAARLARLFAAYAVQRPALLVDWGDGRDTDGRGVTIDDDLAWQP
ELWRRLVDRIDAPPPPARHLSTVAQLRDRSESLDLPARLSLFGHTRLPLTEVELLSALAE
HRDVHLWLPHPSGELWDRLTGRTAGDRAADTSHQMAEHPLLATLGRDSRELQLALAAVPA
VDRHLPSPAARESLLGWLQNDLRGNKVSAEGRRPAAEDRSVQVHACHGTARQVDVLRDVL
LGMLQADPTLEPRDILVMCPDIETYAPLISARFGLGDLDRYGHPAHRLRVQLADRSLTQT
NPLLGVASQLLDLAGSRATASQVLDLAETEPVRRRFRFTDDDLDTVTAWVREAGVRWAFD
RGDRDRFGLADYPQNTWRFGLDRVLAGVTMSADAHAWIGTTLPLDDVGSTRIELAGRFAE
YVDRLRAATDRLDGTQPLATWLDALRDGIERLTRVGADDGWQVGQVHREFAEVAAGAGEL
AVTPLRLPDVRSLLSAHLAGRPTRANFRSGSLTVCTMVPMRSVPHRVVCLLGLDDGVFPR
FGLADGDDVLARCPVTGERDVRSEDRQLMLDAILAATESLVITYTGANEYSGQPRPPAVP
LGELLDALDRTTESPVRETVVVNHPLQPFDRKNLEAGRLGTPGPFTFDPAALVAARVGGG
SRPPRPAFLAEPLTLPGGEDVALADLLAFFRDPVKGFFRALDVTLPWEVDGVSDAMPVEI
DNLEKWSVGDRMLRDMLAGIHPDAALNAEWRRGTLPPGRLGWRTATDLRDIARGLAVAAY
PHRQGGATAYDVDVDLGGGRRLTGTVPGVHGYRLVSVSYSRLDAKQLLTSWIQLLALSAN
DEDHNWTALAIGRPRSGRTPASRLFGPVGAQARTLLADLISVYDGGRREPLPLPLKTSFA
WCQARRTDDEPMIAAGRRWRPANYDGENADPAHVRVWGPNAPLKVLLEPTRPGEQWPGEP
TRLGAYAARVWEPMLRFEQGAP
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgactctgtacctgcaccgcgccgagcgcacggacgtgctcgccgacggactgggggag
ctgctcgccacgccgctcgccgacccgttcgccgaggagctcgtggtggtgccggccaag
ggcatcgagcggtggctgtcgcagcgtctcgcgcaccggttgggagccgccgagggttcg
ggggacggcgtgtgtgccggggtccggttcacgtcgccgcgctcgctggtgtctgcggtg
ctggggctcgatcaggacgacccctgggccgcggacgcgatggcgtggccgttgctcgcc
gtgctggacgagtccctcgacgacgcctggtgcgagcccgtcgcccggcatctcgggcag
ttcgacagcggcgccgaggccgagctgcgccgaggccgccggtacgccgtcgcggcgcgg
ctggcccggctcttcgcggcgtacgccgtccagcggccggcccttctcgtggactggggc
gacgggcgggacaccgacggtcgcggagtcacgatcgacgacgacctggcctggcagccg
gagctctggcggcggctggtcgaccggatcgacgcaccgccgccccccgcgcgccacctc
agcaccgtcgctcagcttcgcgaccggtcggagtctctcgacctgcccgcccgtctctca
ctcttcggccacacccgcctgccgctgacggaggtcgagctgctctcggccctggccgag
caccgcgacgtccacctctggctgccccatcccagtggggagctctgggaccgcctcacc
ggccggaccgccggtgatcgagctgccgacacgagccaccagatggccgagcacccgctc
ctggccaccctcgggcgggacagtcgcgagctgcagctggcgctggccgcggtgccggcc
gtcgaccgtcacctgccttcgccggccgcccgcgagtcccttctcggctggctgcagaac
gacctgcgcggcaacaaggtgagcgccgaggggcgccggccggccgccgaggaccggagc
gtgcaggtgcatgcctgccacggcacggcccggcaggtcgacgtactgcgggacgtgctg
ctcgggatgttgcaggccgacccgacactggagccgcgcgacatcctggtgatgtgcccg
gacatcgagacctacgcgccgttgatcagcgcgcgcttcggtctcggcgacctcgatcgg
tacggtcatcccgcccatcggctccgggtgcagctggccgaccggtcgctgacccagacg
aatccgctgctcggcgtcgcgtcgcagctgctcgacctggccggcagccgggcgacggcc
agccaggtgctcgatctggccgagaccgagccggtccgccggcgcttccggttcaccgac
gacgacctcgacaccgtcaccgcctgggtccgggaggccggtgtgcgatgggcgttcgac
cgcggcgaccgcgaccggttcggcctggccgactacccgcagaacacctggcggttcggc
ctcgaccgggtgctcgccggcgtcacgatgtccgccgacgcgcacgcctggatcggcacc
acgctgccgctcgacgacgtcggcagcacccggatcgagctggccggccggttcgcggag
tacgtcgaccggttgcgcgcggcaactgaccggctcgacggcacccagccgctggcgacc
tggctggacgcgttgcgcgacgggatcgaacgactgacccgggtcggcgccgacgacggc
tggcaggtcggccaggtgcaccgcgagttcgccgaggtcgccgccggcgcgggggagctg
gccgtgaccccgctgcggcttcccgacgtccggtcgttgctgtcggcccatctggccgga
cggccgacccgggcgaacttccgcagtggctcgctgaccgtctgcacgatggtgccgatg
cggtccgtgccgcaccgggtggtctgcctgctgggcctcgacgacggcgtgttcccgcgg
ttcggcctggccgacggcgacgacgtcctggcccgctgcccggtgaccggcgagcgggac
gtccgcagcgaggaccggcagctgatgctcgacgcgatcctcgcggccaccgagtcgctg
gtgatcacgtacaccggcgccaacgagtactccggtcagccgcggcccccggccgtcccg
ctcggggaactgctcgacgcgctcgaccgcacgaccgagtcgcccgtgcgggagaccgtc
gtggtcaaccatccgctgcagcccttcgaccgcaagaatctcgaggccggtcggctcggc
actcccggtccgttcacgttcgacccggccgcgctggtcgcggcccgggtgggcggcggt
tcccggccgccgcggccggcgttcctggccgagccgctgacgctgcccggcggcgaggac
gtcgcgctggcggacctgctcgcgttcttccgcgacccggtgaagggcttcttccgggcc
ctggacgtgaccctgccgtgggaggtcgacggcgtctcggacgcgatgccggtggagatc
gacaacctggagaagtggtcggtcggcgaccggatgctgcgcgacatgctggccggcatc
caccccgacgcggcgctcaacgccgagtggcgccggggaaccctgccaccgggacggctc
ggctggcggaccgcgaccgacctccgcgacatcgcccggggcctcgcggtcgccgcgtac
ccgcaccggcagggaggcgccacggcgtacgacgtggacgtcgacctcggcggcggccgg
cggctcaccggtacggtgcccggcgtgcacgggtaccggctggtctcggtgagctactcg
cggctcgacgcgaagcagttgctgacctcctggatccagttgctcgcgctgtcggccaat
gacgaggaccacaactggacggcgctggccatcggccgcccgcgcagtggccgtaccccg
gcgagccggctgttcggtccggtcggagcccaggcgcgtacgctgctcgccgacctgatc
tcggtgtacgacggcggccggcgcgagccgctgccgctgccgctgaagacttcgttcgcc
tggtgccaggcgcgccggaccgacgacgagccgatgatcgcggccgggcggcggtggcgt
ccggcgaactacgacggcgagaacgcggatcccgcgcacgttcgggtctggggacccaac
gccccgctcaaggtcctgctggagccgacgcggccgggcgagcagtggccgggcgaaccg
acccggctcggggcctacgcggcccgggtctgggagccgatgctgcgcttcgagcaggga
gcgccgtga
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