Kribbella flavida: Kfla_4594
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Entry
Kfla_4594 CDS
T01155
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kfl
Kribbella flavida
Pathway
kfl03030
DNA replication
kfl03430
Mismatch repair
kfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Kfla_4594
03430 Mismatch repair
Kfla_4594
03440 Homologous recombination
Kfla_4594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kfl03032
]
Kfla_4594
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_4594
Enzymes [BR:
kfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Kfla_4594
DNA replication proteins [BR:
kfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Kfla_4594
DNA repair and recombination proteins [BR:
kfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Kfla_4594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADB33612
UniProt:
D2PY06
LinkDB
All DBs
Position
complement(4941095..4942342)
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AA seq
415 aa
AA seq
DB search
MYAVIDTETTGLLPGHRHRVIEIAVVLLDQHGRFEHEWVTLLNPQRDLGPQHIHGILTAD
VLAAPEFVDVARHLGALLAGRMVVGHNVEFDLGFLRAEFARLGHVVPLITERSMCTMALA
GYLYPGSKRTLGACCAAAGISLQGWHSALADTRATAELFATYLRSFPSPPPWQWAYEEIR
GLPWPELPGTTFTPTVRPVHAGGRHGWMSRLVDQLPRVPEPPQADSYLSVLDTLLADREI
DAAGADLLVHVATDLALTRSQVDRLHGSYLDGLAAAVWRDGDITGGQRADLDRVATMLGR
TAADVDDALLAASNGQYVVPARPGARGFPPGSTLVFTGDMVEAREVWWDRAVAAGFRPQE
AVRPDTTFVVAADVDSLSLKARAAREYGVPIIPVEDFRRMVPAHLLQSGPEQKAG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccgtcatcgacaccgagacgaccggcctgctgcccgggcaccggcaccgggtg
atcgagatcgcggtcgtgctgctcgaccagcacggccggttcgagcacgagtgggtgacg
ctgctgaacccgcagcgcgatctcggcccgcagcacatccacgggatcctgaccgccgac
gtgctggccgcgccggagttcgtggacgtcgcgcgtcatctcggcgcgctgctcgcgggg
cggatggtggtcgggcacaacgtggagttcgacctcgggttcctgcgggcggagttcgcc
cggctcgggcacgtggtgccgttgatcaccgagcggtcgatgtgcacgatggcgctcgcc
ggctatctgtacccggggtcgaagcggacgttgggggcatgctgcgccgcggccgggatc
tccctgcagggttggcattcggccctcgcggacacgcgcgcgacggctgagctgttcgcg
acgtacctgcggtcgttcccgtccccgccgccgtggcagtgggcgtacgaggagatccgt
gggctgccgtggccggagctgccgggcacgactttcacgccgaccgtgcgaccggtgcac
gccggcggccggcacgggtggatgagccggctggtcgatcagctgccccgggtgccggag
ccgccgcaggccgactcgtacctgagcgtcctggacacgttgctggccgatcgcgagatc
gatgccgccggtgcggacctgctggtgcacgtggcgacggatctcgctctgacccgctcg
caggtcgatcggctgcacggctcgtacctcgacgggctggccgccgccgtctggcgcgac
ggcgacatcaccgggggacagcgcgcggatctggatcgggtcgcgaccatgctcgggcgg
actgccgccgatgtggacgatgcgttgctggcggcgagcaacggccagtacgtcgtaccg
gctcggccgggggcgcgcgggtttccgccgggcagcacgctggtgttcaccggcgacatg
gtcgaggcgcgggaggtctggtgggaccgggcggtcgcggccgggttccgcccgcaggag
gcggtgcggccggacacgacgttcgtggtggcggccgacgtcgacagcctgtcgttgaag
gcgcgggccgcgcgggagtacggcgtacccatcatcccggtggaggacttccggcgcatg
gtgccggcgcacctgctgcagtccggccctgagcagaaggcaggctga
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