Kribbella flavida: Kfla_5063
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Entry
Kfla_5063 CDS
T01155
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kfl
Kribbella flavida
Pathway
kfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kfla_5063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kfl03021
]
Kfla_5063
03019 Messenger RNA biogenesis [BR:
kfl03019
]
Kfla_5063
Transcription machinery [BR:
kfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Kfla_5063
Messenger RNA biogenesis [BR:
kfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Kfla_5063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADB34079
UniProt:
D2Q3F6
LinkDB
All DBs
Position
complement(5459827..5462145)
Genome browser
AA seq
772 aa
AA seq
DB search
MTETVEASDGASAPAAAAATTRRRKTGGGLEGMLLPELKQLAGTLGIKGTGALRKGQLIE
AIKAAQGGGGTTGGGSRARSSQPTLDEATTEPAPSAKSAAPEAPVREGSRRARAAAAGTA
VEQNGAAATGAAQTTPELQTSAPQTSGGQTSAGQTAPAAQNGGADTAPAAQNGTADRADE
REGRSEDRGRGRGRENQARDGQSRDGQAREGQARDGQTREAGRESQGRDGGREQARDGRD
GQARDGVRDRDGQNRDGGREQSRDGGREQREQGRDAGREQARDGRDGGNRDRDGRDRDGR
DRDGQARDGQRDQRGNRADGRADGRTDTRIDSRADDRGEEGDGRRRRRRGRDRDRNRDGR
DGRDTGRDAGRSRGRGERFDPEPTISEDDVLVPAAGILDVLDNYAFVRTSGYLPGPNDVY
VALSMVKRSGLRKGDAITGAVKQPSDGERKEKFNPLVRIDTVNGSDPEIAKQRQDFNKLT
PLYATERLRLETEPNILTTRIVDIVSPIGKGQRGLIVSPPKAGKTMVLQALANAITTNNP
EVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELAIERAKRLVELGHDV
VVLLDSITRLGRAYNIAAPASGRILSGGVDSSALYPPKRFFGAARNIEDGGSLTILATAL
IETGSKMDEVIFEEFKGTGNMELRLRREFADRRIFPAIDVVASGTRREELLMSKDETQVV
WKLRRVLSALDGQAALELLIGKLKESKSNIEFLLQVNKTTPSAGGRNTDDGN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaactgttgaagcctccgacggcgcctcggcgccggccgctgcggccgcgacc
acgcgtcgccgcaagaccggaggcggcctcgagggcatgctgctccccgagctcaagcag
ctcgccgggacgctgggcatcaagggcaccggcgcactgcgcaagggccagctgatcgag
gcgatcaaggccgcccagggcggtggcggtacgaccggcggaggatcccgtgcccggtcg
agccagccgaccctggacgaggcgaccacggagccggcgccgagcgcgaagagcgccgcg
cccgaggctccggtgcgcgagggcagccgccgggcccgcgccgccgcggccggcacggcc
gtcgagcagaacggcgccgccgctaccggtgcggcgcagaccacccctgagctgcagacg
agcgctccgcagaccagcggcggacagaccagcgccgggcagaccgcgccggccgcgcag
aacggcggcgccgacaccgcgccggccgcgcagaacggtacggcggaccgggccgacgag
cgcgagggccggtccgaggaccgtggccgcggtcgcggccgggagaaccaggcccgggac
ggccagagccgcgacggccaggcgcgcgagggccaggcgcgtgacggacagacccgtgag
gccggtcgcgagagccagggccgtgacggtggacgtgagcaggcgcgggacggccgtgac
ggccaggcgcgcgacggtgtccgcgaccgcgacgggcagaaccgtgacggcggtcgcgag
cagagccgcgacggtggtcgcgagcagcgtgagcagggccgcgacgctggccgtgagcag
gcccgtgacggccgcgacggtggcaaccgggaccgcgacggccgggatcgtgacggccgg
gaccgtgacgggcaggcccgtgacggccagcgtgaccagcggggcaaccgcgccgacggt
cgggccgatggccggaccgacacccggatcgacagccgggccgacgaccgtggcgaggag
ggtgacggccggcgtcgtcgccgccggggccgcgaccgggaccgcaaccgcgacggccgg
gacggccgcgacaccggccgggacgccggtcgcagccggggccgcggtgagcggttcgac
ccggagccgacgatcagcgaggacgacgtgctcgtccccgcggccggcatcctggacgtg
ctcgacaactacgcgttcgtccggaccagcggctacctgcccggcccgaacgacgtgtac
gtcgcgctgtcgatggtgaagcgctccggcctgcgcaagggcgacgcgatcaccggcgcg
gtgaagcagccgtccgacggcgagcgcaaggagaagttcaacccgctggtccggatcgac
accgtgaacgggtcggacccggagatcgccaagcagcgccaggacttcaacaagctgacc
ccgctgtacgcgaccgagcggctgcggctcgagaccgagccgaacatcctgaccacccgg
atcgtcgacatcgtcagcccgatcggcaagggccagcgcggcctgatcgtgtcgccgccg
aaggccggcaagacgatggtgctgcaggcgctggcgaacgcgatcaccacgaacaacccc
gaagtgcacctgatggtcgtgctggtggacgagcggcccgaagaggtcaccgacatgcag
cgcacggtcaagggtgaggtcatcgcctccaccttcgaccggccggccgacgaccacacc
acggtcgcggagctggcgatcgagcgggccaagcgcctggtcgagctgggccacgacgtg
gtggtgctgctcgactcgatcacccgcctgggccgggcgtacaacatcgcggcgcccgcc
agcggccggatcctgtccggtggtgtcgactcctcggcgctctacccgccgaagcggttc
ttcggcgcggcccgcaacatcgaggacggcggctcgctgacgatcctggccacggccctg
atcgagaccggctccaagatggacgaggtcatcttcgaggagttcaagggcaccggcaac
atggagctgcggctgcgccgcgagttcgccgaccgccggatcttccccgccatcgacgtc
gtcgcctccggcacccggcgcgaggaactgctgatgagcaaggacgagacccaggtcgtc
tggaagctccgccgcgtcctgtccgccctcgacggccaggcggcgctcgagctcctgatc
ggcaagctcaaggagagcaagtcgaacatcgagttcctgctccaggtgaacaagaccacc
ccgtccgccggcggccgcaacaccgacgacggtaactag
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