Kribbella flavida: Kfla_5692
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Entry
Kfla_5692 CDS
T01155
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kfl
Kribbella flavida
Pathway
kfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kfla_5692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_5692
Enzymes [BR:
kfl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Kfla_5692
DNA repair and recombination proteins [BR:
kfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Kfla_5692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
ADB34698
UniProt:
D2PPA2
LinkDB
All DBs
Position
complement(6123024..6123854)
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AA seq
276 aa
AA seq
DB search
MRLPHPFTGELFDSPVPAGTGWPEDPAGRRTPVARDAGEVLELAGTDDLAELTARVSVCR
ACPRLVGWREDVAVSKRKSFADQPYWGRPIAGWGAPDPRILIVGLAPAVHGGNRTGRVFT
GDRSGDWLFASLHRLGLANQPTSVHAGDGLRLIGARMIAAVRCAPPANKPSPDERDTCNP
WFRRELELVLPTTRAIVCLGKFGFDVLLNALQEIGGTLPRPRPKFGHAAEYVVPVPGGEV
TVIGSFHPSQQNTFTGKLTEPMQDAVLARAKTLAGL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgccgcatccgttcacgggggagttgttcgacagcccggtcccggctgggacc
ggctggcccgaggatccggccggacggcgtactccggtggcgcgggacgccggcgaggtg
ctcgagctcgcggggaccgatgacctggcggagctcaccgcccgggtgtccgtctgccgg
gcctgcccgcgcctggtcggctggcgcgaggacgttgccgtcagcaagcggaagtcgttc
gcggaccagccttactggggccgcccgatcgccggctggggagccccggacccacggatc
ctgatcgtcgggctcgcaccggccgtccacggtggcaaccgcaccggccgcgtcttcacc
ggcgaccggtcgggcgactggctgttcgcctcgctgcaccgtctcggcctcgcgaaccag
ccgaccagcgtgcacgccggcgacggcctgcggctgatcggcgcccggatgatcgccgcg
gtccgctgcgcgccgcccgcgaacaagccgagcccggacgagcgggacacctgcaacccc
tggttccgccgcgaactggagctggtcctgccgacgaccagggcgatcgtgtgcctgggc
aagttcggcttcgacgtcctgctcaacgccctgcaggagatcggcggcacgctgccgaga
ccccgacccaagttcggccacgcggccgagtacgtcgtaccggtgcccggcggcgaggtg
actgtgatcggcagcttccaccccagccagcagaacaccttcaccgggaaactgaccgaa
ccgatgcaggacgccgtcctggcgcgggcgaagaccctggcgggtctgtga
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