Kribbella flavida: Kfla_5872
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Entry
Kfla_5872 CDS
T01155
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
kfl
Kribbella flavida
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_5872
Enzymes [BR:
kfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Kfla_5872
DNA repair and recombination proteins [BR:
kfl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Kfla_5872
Prokaryotic type
Kfla_5872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADB34876
UniProt:
D2PRF8
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All DBs
Position
6308627..6309940
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AA seq
437 aa
AA seq
DB search
MAAVMWFRRDLRLADNPALLDAVAAGDGRVAGVFVLDPALWDAAGDPRRAQLLSSLRSLS
AAMDGKLVVRRGDPATVIPELAAELGAASVHVTTDYGPYGVRRDQAVENALSCPLVATGS
PYAVAPGRILNGQGRSYQVFTPYFRAWLEHGWRQPAEAPATIEWIAARGDALPAAGTIEG
AGEVAAREHWTQWLASVGQYDDERNRPDLDSTSRMSVPLKYGEIHPRTMLTDLARHPGAG
ADAYRRELAWRDFCADLLARYPQAAWKPLRPEFERMVYDEPGDAFTAWCEGRTGYPIVDA
GMRQLAASGFVHNRIRMVVASFLVKDLHVHWKYGARWFMARLRDGDLASNSLNWQWVAGC
GADPSPYYRVFNPITQGLKFDPDGSYVRRWVPELADLPGKSVHEPWKLAAPPAGYPAPIV
DHAEARLESLRRYDAIT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgatgtggttccggcgagaccttcggctggcggacaatccggcgctgctg
gacgcggtggccgccggcgacggccgggtggccggggtgttcgtgctcgaccccgcgttg
tgggacgcggcgggcgatccgcgccgcgcccagctgctcagctcgctgcgcagtctgtcc
gcggcgatggacggcaagctcgtcgtccgccgcggcgatccggccaccgtgatccccgag
ctggcggccgagctcggggcggcgagcgtgcacgtcaccaccgactatggcccgtacggc
gtgcgccgggaccaggcggtcgagaacgcgctgagctgcccgctcgtcgccaccggttcg
ccgtacgccgtggcgcccgggcggatcctcaacggccagggccggtcgtaccaggtgttc
acgccgtacttccgcgcctggctcgagcacggctggcgccaaccggccgaggccccggcg
acgatcgagtggatcgctgcccgcggggacgcgctgcccgcggccggcacgatcgaagga
gccggcgaagtcgccgcccgggagcactggacgcagtggctggcgagcgtcggtcagtac
gacgacgagcggaaccggcccgacctggacagcacttcgcggatgtcggtgcccttgaag
tacggcgagattcacccgcgcacgatgctcaccgacctggccaggcaccccggtgcgggc
gccgacgcgtaccggcgcgagctggcctggcgcgacttctgcgccgacctgctggcgcgg
tacccgcaggcggcctggaagccgttgcggccggagttcgagcggatggtctacgacgaa
ccgggcgacgccttcaccgcctggtgcgagggacggaccggctacccgatcgtcgacgcg
ggcatgcggcaactggccgccagcggcttcgtgcacaaccggatccggatggtcgtcgcg
tcgttcctggtcaaggacctgcacgtgcactggaagtacggcgcccgctggttcatggcc
cggctgcgcgacggcgacctcgcctcgaacagcctgaactggcagtgggtcgccggctgc
ggcgccgacccgtcgccgtactaccgcgtcttcaacccgatcacccagggcttgaagttc
gaccccgacggcagctacgtccgccgctgggtcccggagctcgccgacctgcccggcaag
tccgtgcacgaaccctggaagctcgccgccccgccggccggctatcccgcacccatcgtc
gaccacgccgaagcccggctggagtccctgcgccgctacgacgcgatcacgtag
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