Kribbella flavida: Kfla_5990
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Entry
Kfla_5990 CDS
T01155
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kfl
Kribbella flavida
Pathway
kfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kfla_5990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kfl03019
]
Kfla_5990
03110 Chaperones and folding catalysts [BR:
kfl03110
]
Kfla_5990
03029 Mitochondrial biogenesis [BR:
kfl03029
]
Kfla_5990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kfl04147
]
Kfla_5990
Enzymes [BR:
kfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Kfla_5990
Messenger RNA biogenesis [BR:
kfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Kfla_5990
Chaperones and folding catalysts [BR:
kfl03110
]
Heat shock proteins
HSP60 / Chaperonin
Kfla_5990
Mitochondrial biogenesis [BR:
kfl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Kfla_5990
Exosome [BR:
kfl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Kfla_5990
Exosomal proteins of other body fluids (saliva and urine)
Kfla_5990
Exosomal proteins of breast cancer cells
Kfla_5990
Exosomal proteins of colorectal cancer cells
Kfla_5990
Exosomal proteins of bladder cancer cells
Kfla_5990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
Motif
Other DBs
NCBI-ProteinID:
ADB34993
UniProt:
D2PSU1
LinkDB
All DBs
Position
complement(6431071..6432696)
Genome browser
AA seq
541 aa
AA seq
DB search
MPKLISFNEEARRGLERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMGLKKGIE
KATEAVSEQLLALAKPVETREQIAATASISAADTQVGQIIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISPYFVTDTERMEAVLDDPYILVVNSKISSIKDLVPVLEKVMQ
TGKPLAIIAEDLEGEALATLVVNKIKGTFKTVAVKAPGFGDRRKAMLTDIAILTGGQVIS
EEVGLKLDTVDLELLGQARKVVVTKDETTIVEGTGDADSIQGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SVKAFEKLELEGDEATGAQIVRHAVEAPLKQIAVNAGLEGGVVVEKVRNLEPGHGLNAAT
GEYVDLIATGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKASAAPGGAPDMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagctgatttctttcaacgaagaggcgcgccgcggcctcgagcggggaatgaac
accctcgccgacgccgtcaaggtgacgcttggccccaagggccgcaacgtcgtcctggag
aagaagtggggcgcccccacgatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggggccgagctcgtcaaggaagttgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctggcccaggctctcgtccgc
gagggtctgcgcaacgtcgccgccggcgccaacccgatgggcctgaagaagggcatcgag
aaggcgaccgaggccgtcagcgagcagctgctggcgctggccaagccggtcgagacccgg
gagcagatcgctgcgaccgcctcgatctcggccgccgacacccaggtcggccagatcatc
gccgaggcgatggacaaggtcggcaaggaaggtgtcatcaccgtcgaggagagcaacacc
ttcggtctggagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcgccg
tacttcgtgaccgacaccgagcggatggaagcggttctcgacgacccgtacatcctcgtg
gtgaacagcaagatctcgagcatcaaggacctggtcccggtgctggagaaggtcatgcag
accggcaagccgctggcgatcatcgccgaggacctcgagggcgaggcgctggcgaccctg
gtcgtgaacaagatcaagggcaccttcaagaccgtcgccgtcaaggcgccgggcttcggt
gaccgccgcaaggccatgctgaccgacatcgccatcctcaccggcggccaggtcatctcc
gaagaggtcggcctcaagctcgacaccgtggacctggagctgctcggccaggcccgcaag
gtggtcgtcaccaaggacgagaccaccatcgtcgagggcaccggcgacgccgactcgatc
cagggccgggtcaaccagatccgcgccgagatcgagaagtcggactccgactacgaccgc
gagaagctgcaggagcggctggccaagctggccggcggcgtcgcggtgatcaaggtcggc
gcggccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtcgcgctgctgcaggcg
tcggtgaaggcgttcgagaagctggagctcgagggcgacgaggcgaccggtgcgcagatc
gttcggcacgccgtcgaggcgccgctgaagcagatcgccgtcaacgccggcctcgagggt
ggcgtcgtggtggagaaggtccgcaacctcgagccgggtcacggtctgaacgccgcgacc
ggcgagtacgtcgacctgatcgccaccggcatcatcgaccccgccaaggtgacccgctcg
gcgctgcagaacgcggcctcgatcgcggccctgttcctcaccaccgaggcggtcatcgcc
gacaagccggagaaggcctcggccgctccgggtggcgcccccgacatgggcggcatggac
ttctga
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integrated database retrieval system
