Kocuria flava: AS188_02840
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Entry
AS188_02840 CDS
T04206
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kfv
Kocuria flava
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kfv03032
]
AS188_02840
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_02840
Enzymes [BR:
kfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AS188_02840
DNA replication proteins [BR:
kfv03032
]
Prokaryotic type
DNA Topoisomerases
AS188_02840
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AS188_02840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ALU38856
UniProt:
A0A0U3HDI1
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All DBs
Position
complement(608670..610739)
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AA seq
689 aa
AA seq
DB search
MATEEPQQREYGAGDITVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGY
CDAIEVVLQADGGVRVSDNGRGIPVDVHPTEGKPTVEVVMTILHAGGKFGGGGYAVSGGL
HGVGISVVNALSRRVETEVRRQGRVWRMAFGDGGRPQGPLEAGEETDRTGTTQVFWPDPE
IFETVEFDFETLRARFQQMAFLNKGLRITLVDERRLEETGEEIAGSGADAGEPVEGRDGG
TDAPQFNHLGHDEAGHRRVVYKYDHGLLDYVTFLNTTKKADLVHDDVIALEAEDGGRNMS
LELAMQWTTAYSESVHTYANTINTHEGGTHEEGFRSALTGLINRYARENRLLRDKDENLT
GDDVREGLTAVISIKLTEPQFEGQTKTKLGNSEAKTFVQREVNDRFGDWLERNPAAAKEI
IRKAINASQARLAARKARETTRRKGLLESGGMPGKLKDCSSKDPSVSEIYLVEGDSAGGS
AVQGRDPAHQAILPLRGKILNVERARLDRALSNAEVQSMITAFGAGIGDDFDIEKARYHK
IVLMADADVDGQHITTLLLTLLFRFMRPLIEHGFVYLAQPPLYRVKWSNAPHDYVYSDAE
RDQVVARGLANNQRLPKENGIQRYKGLGEMDYTELWDTTMDPDRRTLLQVTMEDAAAADQ
TFSVLMGEDVESRREFIQQNAKDIRFLDI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacagaggaaccgcagcagcgcgagtacggcgccggcgacatcacggtgctggag
ggcctcgaggccgtccggaagcgccccggcatgtacatcggctcgacgggcccgcgcggg
ctgcaccacctggtctacgaggtggtcgacaactcggtggacgaggccctggcggggtac
tgcgacgccatcgaggtggtgctgcaggccgacggcggcgtgcgcgtgagcgacaacggc
cgcggcatccccgtggacgtccaccccaccgagggcaagcccaccgtcgaggtcgtcatg
accatcctgcacgccggcggcaagttcggcggcggcggctacgcggtctccggcggcctg
cacggcgtgggcatctcggtggtcaacgcgctgtcccggcgcgtcgagaccgaggtgcgg
cgccagggccgcgtgtggcggatggccttcggcgacggcggccgtccccagggcccgctc
gaggccggcgaggagacggaccggaccggcaccacgcaggtgttctggccggacccggag
atcttcgagaccgtcgagttcgacttcgagacgctgcgggcgcggttccagcagatggcg
ttcctgaacaagggcctgcggatcacgctcgtggacgagcgccgcctggaggagaccggg
gaggagatcgccggctcgggcgccgacgcgggcgagccggtcgagggccgcgacggcggc
accgacgccccgcagttcaaccacctgggccacgacgaggccgggcaccggcgcgtggtc
tacaagtacgaccacggcctgctcgactacgtcaccttcctgaacaccaccaagaaggcc
gacctggtccacgacgacgtcatcgcgctcgaggccgaggacggcggccgcaacatgtcc
ctcgagctcgcgatgcagtggacgaccgcctacagcgagtcggtgcacacctacgcgaac
acgatcaacacccacgagggcggcacccacgaggagggcttccgctccgcgctgaccggg
ctgatcaaccgctacgcgcgcgagaaccggctgctgcgggacaaggacgagaacctcacc
ggcgacgacgtccgcgaggggctcacggcggtcatctcgatcaagctcaccgagccgcag
ttcgagggccagacgaagaccaagctcggcaactcggaggccaagaccttcgtgcagcgg
gaggtcaacgaccggttcggcgactggctcgagcgcaacccggccgccgcgaaggagatc
atccgcaaggccatcaacgcctcccaggcgcgcctggccgcccgcaaggcacgcgagacg
acccggcgcaagggcctgctcgagtccggcggcatgcccggcaagctcaaggactgctcc
tccaaggacccctcggtctcggagatctacctcgtggagggcgactccgcgggcggctcc
gcggtgcagggccgcgacccggcccaccaggcgatcctgccgctgcgggggaagatcctc
aacgtggagcgcgcccgcctggaccgggcgctgtccaacgccgaggtgcagtcgatgatc
acggccttcggcgccgggatcggggacgacttcgacatcgagaaggcccggtaccacaag
atcgtgctcatggccgacgccgacgtcgacggccagcacatcaccacgctgctgctgacc
ctgctcttccggttcatgcgcccgctcatcgagcacggcttcgtctacctcgcgcagccg
ccgctgtaccgggtcaagtggtccaacgccccgcacgactacgtctactccgacgccgag
cgggaccaggtcgtcgcccgcgggctggcgaacaaccagcggctgccgaaggagaacggc
atccagcggtacaagggtctcggcgagatggactacaccgagctgtgggacaccaccatg
gaccccgaccgccggaccctgctgcaggtcaccatggaggacgccgccgccgcggaccag
acgttctccgtgctcatgggcgaggacgtcgagtcccgccgcgagttcatccagcagaac
gccaaggacatccggttcctcgacatctga
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