Kocuria flava: AS188_06675
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Entry
AS188_06675 CDS
T04206
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kfv
Kocuria flava
Pathway
kfv03420
Nucleotide excision repair
kfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AS188_06675
03430 Mismatch repair
AS188_06675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_06675
Enzymes [BR:
kfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS188_06675
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AS188_06675
MMR (mismatch excision repair)
Other MMR factors
AS188_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
MSSS
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALU39488
UniProt:
A0A0U3HVZ0
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All DBs
Position
1476787..1479240
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AA seq
817 aa
AA seq
DB search
MDYLFDNPLLPSAPPAPPAAPRPAAAPEALVEGLNEPQRAAVEHAGGPLLIVAGAGSGKT
RVLTHRIAHLLATGRAHQGQILAITFTNKAAAEMRERVVELVGDSARSMSISTFHSFCVR
VLRREAASVGLKSTFSIYDAVDSLRLITLVARQHDLDPKRFAPKSIQHRISALKNELVDD
ETFLARTSETDPFESAVAQVYRGYTERLRAANAMDFDDLISQTVHMFRAFPQVAEYYRRK
YRHVLIDEYQDTNHAQYALVRELVGTAAPEGQGGPAAVPPAELTVVGDSDQSIYAFRGAD
IRNIVDFEQDYPEARTILLEQNYRSTQNILTAANAVIAQNKGRREKRLWTASGDGEKIVG
YAAENEHEEARFIAEEIDRLQDEDGYRPGDVAVFYRTNAQSRSLEEILMRVGLPYKVVGG
TRFYERKEIKDALSYLRAVVNPDDDVNVRRIVNEPKRGIGDRAEGAVVALADRERISFMA
ALRRADEAPGLATRSLNAVRSFAQLMDDLATVAESSGAATVLEAVLEQSGYLAALRGSSD
PQDESRVENLAELVAVVREFERDNPDAGLAEFLEHVSLVADADQIPSRPPAPGTEGGPSA
EQIAAEVAEARAQGVVTLMTLHTAKGLEFPVVFLTGLEHGLFPHQRSLTDEKEMEEERRL
AYVGLTRARERLYLTRSEFRSMWGQSQYNPASPFLDEIPAGLVDWKREGAAAAPSWGSAV
HGGQRRDPMRGSYWGAAASANAAFERMAPPRGSAAGRVQPNKEIPSLAVGDTVEHTTFGK
GTVVSVEGAGDKTVAKVRFGAEEKRLLLRYAPLTKVG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggactacctcttcgacaatcccctcctgccctccgcgcccccggcccctccggccgcc
ccgcggcccgccgccgccccggaggcgctcgtggaggggctcaacgagccccagcgggcg
gccgtggagcacgccggcggacccctgctgatcgtcgcgggcgccggctccggcaagacc
cgcgtgctgacccaccggatcgcccacctcctggccaccggccgggcccaccaggggcag
atcctcgcgatcacgttcacgaacaaggccgcggcggagatgcgcgagcgcgtcgtcgag
ctcgtgggggactcggcgcggtcgatgtcgatctccaccttccactccttctgcgtgcgc
gtgctccggcgcgaggcggcgagcgtgggcctgaagtcgacgttctccatctacgacgcc
gtcgactcgctgcggctgatcacgctcgtggcccgccagcacgacctcgacccgaagcgc
ttcgcgcccaagagcatccagcaccgcatctccgcgctgaagaacgagctggtcgacgac
gagacgttcctggcccgcacctcggagacggacccgttcgagagcgccgtcgcccaggtc
taccgcggctacaccgagcggctgcgcgcggccaacgcgatggacttcgacgacctcatc
agccagaccgtgcacatgttccgggccttcccgcaggtcgccgagtactaccggcgcaag
taccggcacgtgctcatcgacgagtaccaggacaccaaccacgcccagtacgccctggtg
cgcgagctcgtgggcaccgccgcccccgaggggcagggcgggcccgccgcggtgcccccc
gccgagctgacggtggtgggcgactccgaccagtcgatctacgcgttccgcggcgcggac
atccgcaacatcgtcgacttcgagcaggactaccccgaggcgcgcaccatcctgctcgag
cagaactaccgctcgacccagaacatcctcacggcagccaacgccgtcatcgcccagaac
aagggccgccgcgagaagcggctgtggaccgcctccggggacggggagaagatcgtcggc
tacgccgccgagaacgagcacgaggaggcccgcttcatcgccgaggagatcgaccggctc
caggacgaggacggctaccggcccggcgacgtcgccgtgttctaccgcaccaacgcccag
tcgcgctcgctcgaggagatcctcatgcgcgtgggcctgccctacaaggtcgtgggcggc
acccgcttctacgagcgcaaggagatcaaggacgccctgtcctacctgcgcgcggtcgtc
aaccccgacgacgacgtcaacgtccgccgcatcgtcaacgagcccaagcgcgggatcggc
gaccgcgccgagggggcggtcgtggccctcgcggaccgggagcggatctccttcatggcc
gccctgcgccgcgccgacgaggcccccggactggccacgcgctcgctgaacgcggtgcgc
tccttcgcccagctcatggacgacctcgcgaccgtggccgagagctcgggcgcggcgacc
gtcctcgaggccgtcctcgagcagtccggctacctggccgcgctgcgcgggtcctccgac
ccccaggacgagtcccgggtggagaacctcgccgagctcgtcgcggtggtccgggagttc
gagcgggacaacccggacgccgggctcgccgagttcctcgagcacgtctccctcgtggcc
gacgccgaccagatccccagcaggccgccggcgccggggaccgagggcgggcccagtgcc
gagcagatcgcggccgaggtcgccgaggcccgcgcacagggggtcgtgaccctgatgacc
ctgcacacggccaagggcctcgagttcccggtggtcttcctcaccggcctggagcacggg
ctgttcccgcaccagcgctccctcaccgacgagaaggagatggaggaggagcggcggctc
gcctacgtgggcctgacccgcgcccgcgagcggctctacctcacccgctccgagttccgc
tcgatgtggggccagtcgcagtacaacccggccagcccgttcctcgacgagatccccgcc
gggctcgtggactggaagcgcgagggcgccgcggccgcgccgtcgtggggctcggcggtc
cacggcggccagcgccgcgacccgatgcgcgggtcctactggggggccgccgcgtccgcg
aacgcggcgttcgagcggatggccccgccccggggcagcgccgccgggcgggtccagccc
aacaaggagatcccctccctggcggtgggggacacggtcgagcacaccaccttcgggaag
ggcaccgtggtctccgtggagggcgccggggacaagaccgtggcgaaggtgcgcttcggg
gccgaggagaagcggctgctgctgcgctacgccccgctgaccaaggtcggctga
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