Kocuria flava: AS188_08375
Help
Entry
AS188_08375 CDS
T04206
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kfv
Kocuria flava
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kfv03016
]
AS188_08375
Enzymes [BR:
kfv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AS188_08375
Transfer RNA biogenesis [BR:
kfv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AS188_08375
Prokaryotic type
AS188_08375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ALU41151
UniProt:
A0A0U3I045
LinkDB
All DBs
Position
1878716..1879696
Genome browser
AA seq
326 aa
AA seq
DB search
MPAGLVVVDKPAGWTSHDVVARLRRLAGTRKVGHAGTLDPMATGVLVAGIGSATRLLTYV
VGQDKTYEAVLRLGVSTVTDDAEGEPTAVADPAAVAALTDGAVTAAAARLTGDLMQVPAS
VSAIKVDGRRAYAEVRAGKDVELAARPVTVHAFDVHRITRTDDGAGHPVVDVEATVTCSS
GTYVRALARDLGAGLGTGGHLTALRRTRVGALGLEHAATLEELAAHVAAGRPLPVTAPEE
AAAGLFPVRRLTAAEAGDLAHGRRIGPTAGPDEAGTGAVTAGLAPDGRLVALLRDRGLPG
ERTAKPELVLLPGERFDGGPGAGEER
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccgggctcgtggtcgtggacaagcccgccggctggaccagccacgacgtcgtc
gcccggctgcgccggctggccggcacccgcaaggtcggccacgccggcacgctggacccc
atggccaccggcgtgctcgtggccggcatcggcagcgccacccgtctgctgacctacgtc
gtgggccaggacaagacctacgaggccgtcctgcgcctgggggtctcgaccgtgaccgac
gacgccgagggcgagccgaccgccgtcgccgaccccgcggccgtcgccgccctgaccgac
ggggccgtgaccgccgccgcggcccggctcaccggggacctcatgcaggtccccgcgtcg
gtgagcgcgatcaaggtggacggccggcgcgcctacgccgaggtccgcgccggcaaggac
gtcgagctcgccgcccgccccgtgacggtgcacgccttcgacgtccaccggatcacccgc
acggacgacggcgccgggcaccccgtggtcgacgtcgaggccaccgtgacctgcagctcc
gggacctacgtgcgggcgctggcccgcgacctcggcgccggcctcggcaccggcgggcac
ctcacggcgctgcgccgcacccgcgtcggcgccctcgggctcgagcacgccgcgaccctc
gaggagctcgccgcccacgtggccgccggccggcccctgcccgtcaccgcccccgaggag
gccgccgccgggctgttccccgtccgccggctcaccgccgcggaggccggcgacctcgcc
cacggccgccggatcggccccaccgcgggcccggacgaggccgggaccggggccgtcacc
gcgggcctggcccccgacgggcggctcgtggccctgctgcgcgaccgcgggctgcccggc
gagcgcaccgccaagcccgagctcgtgctgctgccgggggagcgcttcgacggcggcccc
ggagcgggggaggagcggtga
DBGET
integrated database retrieval system
