Kocuria flava: AS188_09170
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Entry
AS188_09170 CDS
T04206
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kfv
Kocuria flava
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kfv03032
]
AS188_09170
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_09170
Enzymes [BR:
kfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AS188_09170
DNA replication proteins [BR:
kfv03032
]
Prokaryotic type
DNA Topoisomerases
AS188_09170
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AS188_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4890
Motif
Other DBs
NCBI-ProteinID:
ALU39890
UniProt:
A0A0U2XNS3
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Position
complement(2066006..2068504)
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AA seq
832 aa
AA seq
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MARRRASTRPSPADELPADFRENIVDIDVTSEMRTSFLEYSYSVIYSRALPDARDGLKPV
QRRILFMMDRMGLRPDRGHVKSARVVGEVMGKLHPHGDSAIYDAMVRLAQPFAMRLPLVD
GHGNFGSVDDGPAASRYTEARMAPAALALTADLDEDVVDFVPNYDNQFSQPGVLPAAYPN
LLVNGSSGIAVGMATNMAPHNLREVVAAARHLVEHPEATLEELIRFVPGPDLPSGGRIVG
LDGIKDAYRTGRGSFRTRAKVSIEQVTPRKQGIVVTELPYMVGPEKVTEKIKEAVQAKKL
QGVSDVVDLTDRRNGLRLVIELKNGFNPQAVLQQLYKHTPMEDSFGINNVALVDGQPRTM
GLLELLQVYVEHRLSVVRRRTGFRLGKKRDRLHLVEGLLVAILDIDEVIRIVRDSDETAV
ARDRLVEAFGLSRTQAEHILELRLRQLTKFSRVELEQEQERLRREIGELEEVLASDARLR
ALVSAELAEVAAAHGDDRRTELLEAEALPGPAAAVLPEPGRRAGAGLALEIADDPCWVLL
STSGQLARTSVQVPLVDPPRRVKHDALTSAVRATARGEIGALTSAGRMVRVQVMDVPVLT
AFEGTPKLGDGVPVKDFLTLARGERLVGLAPLGAVLALGTRRGVVKRVNPDHPLNREDWE
VIGLKDGDEVVGLAESAADDDALVLISREGKLLHFPAGSVRPQGRTAGGVAGMKLSPGDE
VVFFGVVRAADETPVVVTVARAGEVLPGMSPYSVKVTPFAEYPPKGRATGGVRAHRFLKG
ETGLVLAWAGHGPAKAVSATGVARALPVEHGRRDGSGVPLEQVIDAVGPAYG
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgccgtgcgtccacccgcccgtcccccgcggacgagctgcccgccgacttc
cgggagaacatcgtcgacatcgacgtgacctccgagatgcgcacgagcttcctcgagtac
tcgtactcggtgatctactcccgcgccctgcccgacgcccgcgacgggctcaagcccgtg
cagcggcgcatcctgttcatgatggaccggatgggcctgcgtccggaccgcggccacgtc
aagagcgcgcgcgtggtgggcgaggtgatgggcaagctgcacccgcacggggactccgcg
atctacgacgccatggtccgcctcgcccagccgttcgcgatgcgcctgcccctcgtggac
gggcacggcaacttcggctcggtcgacgacggccccgccgcgtcccggtacaccgaggcg
cgcatggccccggccgcgctggcgctcacggccgacctcgacgaggacgtcgtggacttc
gtgcccaactacgacaaccagttctcccagccgggggtgctgccggccgcctacccgaac
ctgctcgtcaacggctcctccgggatcgccgtgggcatggccacgaacatggccccgcac
aacctgcgggaagtcgtcgccgcggcccgccacctcgtggagcaccccgaggccacgctc
gaggagctcatccgcttcgtcccgggcccggacctgccctcgggcgggcggatcgtgggc
ctcgacgggatcaaggacgcctaccgcaccggccggggctcgttcaggacgcgggcgaag
gtctcgatcgagcaggtcaccccgcgcaagcagggcatcgtggtcaccgagctgccctac
atggtgggtcccgagaaggtgacggagaagatcaaggaggccgtgcaggcgaagaagctg
cagggcgtctccgacgtcgtggacctcaccgaccgtcgcaacgggctgcggctcgtaatc
gagctcaagaacggcttcaacccccaggccgtgctccagcagctgtacaagcacaccccc
atggaggactccttcgggatcaacaacgtggcgctggtcgacggccagccgcgcaccatg
ggtctgctggagctgctgcaggtctacgtcgagcaccgcctgtccgtggtgcgccggcgc
accggcttccgcctcgggaagaagcgcgaccgcctccacctcgtcgaggggctgctcgtc
gcgatcctggacatcgacgaggtgatccggatcgtgcgggactccgacgagaccgccgtg
gcccgcgaccggctcgtcgaggccttcgggctgagccggacccaggccgagcacatcctc
gagctgcggctgcggcagctcacgaagttctcccgcgtcgagctcgagcaggagcaggag
cggctgcgccgggagatcggcgagctcgaggaggtcctcgcctccgacgcccggctgcgc
gcgctggtctccgccgagctcgccgaggtcgccgcggcccacggcgacgaccggcgcacc
gagctgctggaggccgaggccctgcccggtccggccgcggccgtcctgccggagccgggc
cggcgcgccggcgcgggcctggccctggagatcgccgacgacccgtgctgggtgctgctg
tccacctccgggcagctggcccggacctccgtgcaggtcccgctcgtggaccccccgcgg
cgggtcaagcacgacgccctgacctccgcggtgcgcgccaccgcccgcggcgagatcggg
gcgctgacctcggccgggcggatggtgcgcgtgcaggtgatggacgtgcccgtgctgacg
gccttcgaggggaccccgaagctcggcgacggcgtgcccgtcaaggacttcctcaccctg
gcccggggcgagcggctcgtgggcctggccccgctgggcgcggtcctggccctgggcacc
cgccgcggcgtcgtgaagcgggtcaaccccgaccacccgctcaaccgggaggactgggag
gtcatcggcctcaaggacggcgacgaggtcgtgggcctggccgagtccgccgccgacgac
gacgcgctggtgctgatcagccgggagggcaagctgctgcacttcccggcgggctcggtg
cgcccgcagggccgcaccgcgggcggggtcgcggggatgaagctctcccccggcgacgag
gtcgtgttcttcggcgtcgtgcgcgccgcggacgagacgcccgtggtcgtgacggtcgcc
cgcgccggcgaggtgctgcccgggatgtcgccgtactccgtgaaggtcaccccgttcgcg
gagtacccgcccaagggccgggccaccggcggggtgcgggcccaccgcttcctcaagggt
gagaccggcctcgtgctggcctgggccggccacggcccggccaaggccgtctccgccacc
ggggtggcgcgggcgctgcccgtcgagcacgggcgccgggacggctccggcgtgccgctg
gagcaggtgatcgacgccgtcggcccggcctacggctga
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