Kocuria flava: AS188_11995
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Entry
AS188_11995 CDS
T04206
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
kfv
Kocuria flava
Pathway
kfv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AS188_11995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_11995
Enzymes [BR:
kfv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AS188_11995
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AS188_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ALU40358
UniProt:
A0A0U3HS62
LinkDB
All DBs
Position
complement(2693366..2694253)
Genome browser
AA seq
295 aa
AA seq
DB search
MPEGHSVHRLARQFADCFAGQALAVSSPQGRFAAGAAALDGAVLEDARAHGKQLFLDFAG
DRVLRSHLGLYGAWSFGGTERFRGASSIGAPRRIGEREDDDDTPADGPLSVPPPVGAVRV
RLVGEEGWADLRGPSLCVLETRAEADAARARLGPDPLDPAADPEPFLAALARSRRPVGAL
LMDQAVVAGIGNIFRAESLFRRGVDPAAPGRSLDRATAEELWAENVALMRTGVRLGRIVT
TDPVDRPGIPEERAWPDHAHYVYGRTGLPCRRCGTPVAAAPLEARTLYWCPTCQR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagggccactcggtccaccgcctcgcccgccagttcgccgactgcttcgccggc
caggccctggccgtcagctccccccagggccgcttcgcggccggggcggcggcgctggac
ggcgccgtgctcgaggacgcccgcgcgcacggcaagcagctgttcctcgacttcgccggg
gaccgggtgctgcgctcgcacctgggcctgtacggggcgtggagcttcggcggcacggag
cgcttccgcggggcctcctccatcggcgccccgcgccggatcggggagcgggaggacgac
gacgacactcccgccgacggcccgctctcggtgcccccgccggtcggggcggtgcgggtg
cggctggtcggcgaggaggggtgggccgacctgcgcgggccctccctgtgcgtgctcgag
acccgcgccgaggccgacgcggcccgggcccggctgggccccgacccgctggacccggcg
gcggacccggagccgttcctggcggcgctcgcccgcagccgccggccggtcggggcgctg
ctgatggaccaggcggtcgtggccgggatcggcaacatcttccgcgccgagtcgctcttc
cgccgcggcgtggacccggccgccccgggtcgctcgctcgaccgcgcgacggcggaggag
ctgtgggcggagaacgtcgcgctgatgcgcaccggcgtgcggctgggccggatcgtgacc
accgaccccgtcgaccgtccggggatccccgaggagcgggcctggcccgaccacgcccac
tacgtctacgggcgcaccgggctcccgtgccggcgctgcgggacaccggtggcggcggcg
ccgctcgaggcgcgcactctctactggtgccccacctgccagcgctga
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