Kocuria flava: AS188_12790
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Entry
AS188_12790 CDS
T04206
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kfv
Kocuria flava
Pathway
kfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS188_12790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kfv03021
]
AS188_12790
03019 Messenger RNA biogenesis [BR:
kfv03019
]
AS188_12790
Transcription machinery [BR:
kfv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AS188_12790
Messenger RNA biogenesis [BR:
kfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AS188_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
NACHT
CoV_NSP2_C
PIP5K
Motif
Other DBs
NCBI-ProteinID:
ALU40484
UniProt:
A0A0U2WVV2
LinkDB
All DBs
Position
complement(2855431..2857416)
Genome browser
AA seq
661 aa
AA seq
DB search
MTETTDLSTGTDETTADPRSAGLSALKLAQLQALASQLGITGARRMRKSLLVDAIAAHQR
GGAVADRDKAVEEKIARTVEKTAEKTEPRADAPAETAPAAEQPARRSRSRRVGSDGVVAA
GAPEAPAERTPQEAPDGQAETRGEQAEDGAQGPRGGEDRSGGDQDGGRGRGRGRGRGQNG
QDQQGGRQDKGGQDQQGGRQDKGGQDQQGGQQRAKGQDARQDKGGQDGEGGSRRSRRNRN
RNERAERNDRAERNERRNRRGRGSGPEVDDTELTEDDVLLPVAGILDVLDNYAFVRTSGY
LPGPNDVYVSLAQVKKHNLRKGDAVVGAIRAPREGEQQNSSRQKFNALVQLTTVNGRTPE
ENKDRVDFGKLIPLYPQERLRLETEPKKIGPRVVDLVAPIGKGQRGLIVSPPKAGKTLML
QSIANAITTNNPEVHLMMVLVDERPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELAIE
RAKRLVEMGMDVVVLLDSMTRLGRAYNLSAPASGRILSGGVDSAALYPPKKFFGAARNIE
NGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRSLADKRIYPAVDVNSSGTRRE
ENLLSPEEIKIMWKLRRVLSGLDQQQALELLTNKLRDTQSNTEFLLQVQKTTLSVKAEND
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaccaccgacctttccacgggtacggacgagaccaccgccgatccgcgcagc
gccgggctgtccgcgctgaagctcgcgcagctgcaggccctggcctcccagctgggcatc
accggcgcccgccggatgcgcaagtcgctgctggtggacgccatcgcggcccaccagcgc
ggcggcgcggtcgccgaccgggacaaggcggtcgaggagaagatcgcccgcaccgtcgag
aagaccgcggagaagaccgagccccgcgccgacgcccccgcggagaccgccccggccgcc
gagcagcccgcccgccgctcgcgctcccgcagggtcggcagcgacggcgtcgtcgccgcc
ggggcgcccgaggccccggccgagcgcaccccgcaggaggccccggacgggcaggccgag
acccgcggcgagcaggccgaggacggcgcccaggggccgcgcggcggcgaggaccgctcc
ggcggcgaccaggacggcggccgcgggcgcggccgcggccgcggccgcggccagaacggc
caggaccagcagggcgggcgccaggacaagggcggccaggaccagcagggcgggcgccag
gacaagggcgggcaggaccagcagggcggccagcagcgcgccaagggccaggacgcccgc
caggacaagggtggccaggacggcgagggcggcagccgccgcagccggcgcaaccgcaac
cgcaacgagcgcgccgagcgcaacgaccgcgccgagcgcaacgagcgccgcaaccgccgc
ggccgcggcagcggcccggaggtggacgacaccgagctgaccgaggacgacgtcctgctg
cccgtggccggcatcctggacgtgctcgacaactacgcgttcgtgcgcacctccgggtac
ctgccgggccccaacgacgtctacgtcagcctcgcccaggtcaagaagcacaacctgcgc
aagggcgacgccgtcgtcggcgcgatccgcgcccctcgcgagggcgagcagcagaacagc
tcccggcagaagttcaacgcgctcgtgcagctgaccacggtcaacggccgcacgcccgag
gagaacaaggaccgggtcgacttcgggaagctgatcccgctctacccgcaggagcggctg
cgcctggagaccgagcccaagaagatcggcccgcgcgtggtcgacctcgtggccccgatc
ggcaagggccagcgcggcctgatcgtctccccgccgaaggccggcaagaccctcatgctg
cagtcgatcgccaacgcgatcaccacgaacaaccccgaggtccacctcatgatggtgctc
gtcgacgagcgccccgaggaggtcacggacatgcagcgcaccgtcaagggcgaggtcatc
gcctcgaccttcgaccgccccgccgacgaccacaccacggtcgccgagctcgcgatcgag
cgcgccaagcgcctcgtggagatgggcatggacgtcgtcgtgctcctggactccatgacc
cgcctgggccgggcctacaacctctccgccccggcctccggccggatcctctccggcggc
gtggactccgcggcgctgtacccgccgaagaagttcttcggcgcggcgcgcaacatcgag
aacggcggctcgctgaccatcctcgcgaccgcgctcgtggagaccgggtccaagatggac
gaggtcatcttcgaggagttcaagggcaccggcaacatggagctgcgcctgtcccgctcg
ctcgcggacaagcggatctacccggccgtggacgtcaactcctcgggcacccgccgcgag
gagaacctcctgtcgccggaggagatcaagatcatgtggaagctgcgccgcgtcctctcc
gggctcgaccagcagcaggccctcgagctgctcacgaacaagctgcgggacacccagtcc
aacaccgagttcctgctgcaggtccagaagaccacgctgtcggtcaaggccgagaacgac
cgctag
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