Kocuria flava: AS188_13905
Help
Entry
AS188_13905 CDS
T04206
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kfv
Kocuria flava
Pathway
kfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AS188_13905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kfv03021
]
AS188_13905
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_13905
Enzymes [BR:
kfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AS188_13905
Transcription machinery [BR:
kfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AS188_13905
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AS188_13905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF6327
Motif
Other DBs
NCBI-ProteinID:
ALU40655
UniProt:
A0A0U3HYS1
LinkDB
All DBs
Position
complement(3121017..3122024)
Genome browser
AA seq
335 aa
AA seq
DB search
MLIAQRPTLSEEVVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVEGVKEDVTEIILNIKKLAVSSEQDEPVVAYLRKQGPGVVTAADITAPAGVEIHN
PDLHIATLNAKGQLELELTIERGRGYVSAAQNKAGDAEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDKLVLDVETKEAISPRDAVASAGTTLVELFGLARELNAAAEGIEIGPSPTD
AAMAADMALPIEDLELTVRSYNCLKREGIHTVGELVGRSEADLMDIRNFGAKSIDEVKAK
LVDLGLSLKDSPPGFDLAARAAAIDDENPFDDVDQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctctcggaagaggtcgtggccgagaaccggtcccgc
ttcgtgatcgaacccctcgagcccggcttcggctacaccctcggcaactccctccgccgc
accctgctgtcctcgatcccgggtgctgccgtgaccagcatccgcatcgacggggtgctc
cacgagttctccaccgtggagggtgtcaaggaggacgtcaccgagatcatcctcaacatc
aagaagctcgccgtctcctcggagcaggacgagccggtcgtcgcctacctgcgcaagcag
ggtcccggcgtcgtgaccgcggcggacatcacggccccggccggtgtggagatccacaac
ccggacctgcacatcgccaccctcaacgcgaagggccagctcgagctcgagctgaccatc
gagcggggccgcggctacgtctcggcggcgcagaacaaggccggggacgcggagatcggc
cggatcccggtcgactccatctactccccggtgctcaaggtgaccttccgcgtggaggcc
acccgcgtcgagcagcgcaccgacttcgacaagctggtcctggacgtggagaccaaggag
gccatctccccgcgggacgccgtcgcctccgccggcaccaccctggtcgagctcttcggc
ctggcccgcgagctgaacgcggccgccgagggcatcgagatcggcccctcgccgaccgac
gccgcgatggccgccgacatggccctgccgatcgaggacctcgagctgaccgtgcggtcc
tacaactgcctcaagcgcgagggcatccacaccgtgggcgagctcgtcggccgctccgag
gcggacctgatggacatccgcaacttcggcgcgaagtccatcgacgaggtcaaggccaag
ctcgtcgacctgggcctctccctcaaggactcgccccccggtttcgacctcgccgcccgc
gccgccgcgatcgacgacgagaacccgttcgacgacgtcgaccagtaa
DBGET
integrated database retrieval system
