Kocuria flava: AS188_14645
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Entry
AS188_14645 CDS
T04206
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kfv
Kocuria flava
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kfv03032
]
AS188_14645
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_14645
Enzymes [BR:
kfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AS188_14645
DNA replication proteins [BR:
kfv03032
]
Prokaryotic type
DNA Topoisomerases
AS188_14645
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AS188_14645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALU40779
UniProt:
A0A0U3GCE0
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All DBs
Position
complement(3272998..3275790)
Genome browser
AA seq
930 aa
AA seq
DB search
MPTKAPKSSGTGKSLLIVESPSKVKTIAGYLGDAYEVESSMGHIRDLPQPSELPAELKKG
PYGKFAVDVEHGFEPYYVVNPDKKKKVTELKRKLKDADALYLATDGDREGEAIAWHLLEV
LKPKVPVYRLTFPEITREAIERAFGELRELDQDLVDAQETRRILDRLYGYEISPVLWRKI
ASGLSAGRVQSVATRLVVERERQRMAFVPADYWDLSGTFARTDGEDAGAAFAARLSTVDG
KRVAGGRDFGDDGVLKGATGKLVHLDETAARELAAGLEDAEFAVRSLETKPYTRRPAAPF
TTSTLQQEAARKLRFTSRTTMQVAQKLYENGYITYMRTDSVALSDQAVSAARRQAAELYG
SDSVPGSPRVYSSKSKNAQEAHEAVRPAGDSFRTPNQVRGELSADAYRLYELIWKRTVAS
QMADAKGSTATVRLGATSSTGHDAEFSASGTVITFRGFLAAYEEGRDEEPAESKDGDKRL
PRMAEGDRLEADGVAADGHRTSPPPRYTEASLVKTLDELGIGRPSTYAAVISTIMDRGYV
RVRGSALIPSWTAFSVVRLLEEHFSDYVDYDFTAEMEEGLDRIARGEEDSTGWLQGFYFG
AGEQDHGLKPIVDDLGEIDARAVNSIPVTEDITLRVGKFGPYLEQAGSVDPETGELTDPV
RANVPEDLAPDELTPEKARELIEVGKADGRELGTDPGTGRTIVAKDGRYGPYVTEVIPEP
TAEELAAQPVEYYKNGKPKPPKKPAKQKPRTGSLLSSMTLQDVTLEDALKILSLPRSLGT
APDGEEITVQNGRFGPYLKKGSDSRSLQSEEQLFTVTLEEALAIYAQPKQRGRGAAKPPL
ADLGADPITERPMVIKDGRFGPYVTDGETNVTVPRGETVEQITAARASQLLAEKRAKGPA
PKKTAARSAAKATSSTAKKSPARKPTRAGK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaccaaggcccccaagagctcgggaacgggcaagagcctgctcatcgtggagtcc
ccctccaaggtcaagaccatcgcggggtacctcggtgacgcctacgaggtggagtcctcg
atggggcacatccgggacctgccccagccctccgagctgcccgccgagctgaagaagggc
ccctacggcaagttcgccgtggacgtcgagcacggcttcgagccctactacgtggtcaac
ccggacaagaagaagaaggtcaccgagctcaagcgcaagctcaaggacgccgacgccctc
tacctcgccaccgacggcgaccgcgagggcgaggccatcgcgtggcacctgctcgaggtg
ctcaagccgaaggtccccgtctaccggctgaccttcccggagatcacccgcgaggccatc
gagcgcgccttcggcgagctgcgcgagctggaccaggacctggtcgacgcgcaggagacc
cgccgcatcctggaccggctctacggctacgagatctccccggtgctgtggcgcaagatc
gcctccggcctgtccgcgggccgcgtccagtccgtggccacgcgcctggtcgtggagcgc
gagcgccagcgcatggccttcgtgcccgccgactactgggacctcagcgggaccttcgcc
cgcaccgacggcgaggacgcaggcgccgccttcgccgcccggctgtccaccgtggacggc
aagcgggtggccgggggccgggacttcggcgacgacggcgtgctcaagggcgccaccggc
aagctcgtgcacctggacgagacggccgcccgggagctggccgccgggctcgaggacgcc
gagttcgcggtccggtcgctggagaccaagccctacacccgccgcccggccgcgccgttc
accacgtccacgctgcagcaggaggccgcccgcaagctgcggttcacctcgcgcaccacc
atgcaggtggcccagaagctctacgagaacggctacatcacctacatgcgcaccgactcc
gtggcgctgtccgaccaggcggtctcggccgcccggcggcaggccgcggagctctacggc
tccgactccgtgcctggctccccgcgcgtgtacagctcgaagtcgaagaacgcccaggag
gcccacgaggccgtgcgccccgccggggactccttccggacgccgaaccaggtccgcggg
gagctctccgcggacgcctaccggctctacgagctgatctggaagcgcaccgtcgcctcc
cagatggccgacgccaagggctccacggccaccgtgcggctcggggcgacctcgtccacc
gggcacgacgccgagttctccgcgtccggcaccgtcatcaccttccgcggcttcctcgcc
gcctacgaggagggccgcgacgaggagccggccgagagcaaggacggggacaagcggctg
ccgcgcatggcggagggcgaccggctcgaggccgacggcgtcgccgcggacggccaccgg
acctccccgccgccgcgctacaccgaggcctcgctcgtgaagaccctcgacgagctgggc
atcggccgcccctccacctacgccgccgtgatctccacgatcatggaccgcggctacgtg
cgggtgcgcgggtccgcgctgatcccgtcctggaccgcgttctccgtggtgcgcctgctc
gaggagcacttctccgactacgtggactacgacttcaccgcggagatggaggagggcctg
gaccgcatcgcccgcggcgaggaggactccaccggctggctgcagggcttctacttcggc
gccggcgagcaggaccacggcctcaagcccatcgtcgacgacctcggggagatcgacgcc
cgcgcggtgaactcgatccccgtcaccgaggacatcaccctgcgcgtgggcaagttcggc
ccctacctcgagcaggccgggtccgtggacccggagaccggcgagctcaccgacccggtg
cgcgccaacgtccccgaggacctcgcccccgacgagctcacccccgagaaggcgcgggag
ctcatcgaggtgggcaaggccgacggccgggagctcggcaccgatccgggcaccgggcgc
acgatcgtggccaaggacggccgctacggcccctacgtcaccgaggtgatccccgagccg
accgccgaggagctcgccgcccagcccgtcgagtactacaagaacggcaagcccaagccc
ccgaagaagccggccaagcagaagccgcgcacgggctccctgctctcctcgatgaccctc
caggacgtcaccctcgaggacgccctgaagatcctctccctgccgcgctcgctgggcacc
gccccggacggcgaggagatcaccgtccagaacggccgcttcggcccctacctcaagaag
ggctcggactcccggtcgctgcagtccgaggagcagctgttcacggtcacgctcgaggag
gccctggcgatctacgcccagcccaagcagcgcggccgcggcgcggccaagccgccgctg
gccgacctcggggccgaccccatcacggagcggcccatggtgatcaaggacggccgcttc
ggcccctacgtcaccgacggggagaccaacgtgacggtcccgcgcggggagacggtcgag
cagatcaccgccgcccgcgccagccagctgctcgcggagaagcgggccaagggtccggcg
cccaagaagacggcggcgcgctcggcggcgaaggccacgtcctccaccgcgaagaagtcc
ccggcccggaagccgacccgcgccgggaagtga
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