Candidatus Kinetoplastidibacterium galati: ST1E_0049
Help
Entry
ST1E_0049 CDS
T02466
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kga
Candidatus Kinetoplastidibacterium galati
Brite
KEGG Orthology (KO) [BR:
kga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kga03016
]
ST1E_0049
Enzymes [BR:
kga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ST1E_0049
Transfer RNA biogenesis [BR:
kga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ST1E_0049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_P-MRP_p29
IBN_N
Motif
Other DBs
NCBI-ProteinID:
AGF49318
UniProt:
M1L9W7
LinkDB
All DBs
Position
691481..693361
Genome browser
AA seq
626 aa
AA seq
DB search
MNMYVFYDEGNAFKTGSVISETDNTLQVISEHGKHIKIKQSNCLFKFDSPDPLTLMKEAV
ILSKEIDTNFLWECSPNNNFNAIDLATEYFGHNPTNIEYVSVLILLHNSPIYFYKKGTGK
YISATQSAISSALINIEKKKLIEQEQEYLKNQMTNGILPKIICENAELLITNPDKKSIYW
KALNAACIELQKSPEQLLLSLKTWPSPLTLFKKRFIYVNFPNGLDFPEFDDIRVIKNLDL
SDNEIYSIDDKNTTEIDDGLSVKELENGEIEVGIHIAAPGLGINPGSTYDRNARFRASTV
YMPSEKIQMQPDEIIKKFSLAKGKEVPALSLYVVFDRNCIITKSRSCTELVKVKENLRIN
HLEEEYTESNLDNPEKDIIYSHWIRPLWKIAKKLNSARQINRGFPDNNSYTDFSFYLEGD
TNDPNSIVHIEKRRRNSPINLVVSEFMILANNLWGGLLKKYNVPGIYRSQQPMSRVKIGT
IPLPHSGIGVPQYIWSTSPLRRYIDLVNQWQLISIVENEIAAPLFSPFRSRGNDLLSIIQ
EFEIRYSAISNFQNEIENYWSIKWLIQNGIKRTNAHVIKDNLVKLSEVPIFADIMGMPKN
LKGTIIEVEITDIDELNCKLICKYIK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtatgttttctatgatgaaggcaacgccttcaaaacaggtagcgtaatctcc
gaaacggataataccctacaagtaatttcagaacatggcaaacacataaaaattaaacaa
tctaactgtttgtttaaatttgacagtcctgatccacttacattaatgaaagaagccgta
atactttcaaaagaaatagatacaaattttttatgggaatgctctcctaataacaacttt
aacgctatagacttagctacagaatatttcggtcataatccaacaaatatagagtatgtt
agtgtattaattttattacataattctcccatatatttctataaaaaaggtactggcaaa
tacatatcagctacgcagtctgcgatatcatctgctttgataaatatagagaaaaaaaaa
ttaatagagcaagaacaagagtatctaaaaaaccagatgacaaatggtattttgcctaaa
attatctgcgaaaatgcagaattattaataactaatccagataagaaatctatttactgg
aaagcattaaatgcagcatgtatagaactccaaaagtctccggaacaactgcttttatct
ttaaaaacttggccaagcccattaactttgtttaaaaaaagatttatttatgtaaatttt
cctaatggtttggattttcctgagtttgatgacatcagggtgattaaaaatttagattta
tcagacaacgaaatttactcaatagatgacaaaaataccaccgagatagatgatgggctg
tctgtgaaagaattggaaaatggagaaatagaagtaggaatacatatagcagctccagga
ttaggaataaaccctggcagcacatatgataggaatgcaaggtttagagcatctactgtt
tatatgcctagtgagaaaatacagatgcaaccagatgagataataaaaaaattctctcta
gctaaagggaaagaagtgccagctttatctttatatgttgtttttgatagaaactgtatt
attactaaatctcgctcttgtactgaattagtaaaagtaaaagaaaatctacgaattaac
catctagaagaagaatatacagaatctaatttggataatccagaaaaagatataatatac
tctcattggataaggcctttgtggaaaattgccaagaaactaaattcagcaaggcaaatc
aacagaggattcccagataataactcttatacagatttctcattttatcttgaaggagat
actaatgaccctaattccatagtacatatagagaaaagaagaagaaactctcctataaat
ttagtagtatcagaattcatgattcttgcaaataacctatggggaggattattaaaaaaa
tataatgttcctggaatatatagatctcaacaaccaatgagcagagtaaaaattggtact
ataccattgccacactctggaataggtgttcctcaatatatatggagcacttccccatta
agaagatatattgatcttgttaatcaatggcaattaatttctatagttgaaaatgaaata
gcagcaccactattttctccattcagaagtagaggtaatgatcttttgagcataatacaa
gaattcgagataaggtattcagccatatcgaattttcaaaacgaaatagaaaattattgg
tctataaaatggttaatccaaaatggaataaagagaactaatgcacatgtaattaaagac
aatctagtaaaattaagtgaagttccgatattcgctgatataatgggtatgcccaagaat
ctaaaaggcacaataatagaagtagagataacagatattgacgagttaaattgcaagtta
atctgcaagtacataaagtga
DBGET
integrated database retrieval system
