Candidatus Kinetoplastidibacterium galati: ST1E_0742
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Entry
ST1E_0742 CDS
T02466
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kga
Candidatus Kinetoplastidibacterium galati
Pathway
kga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ST1E_0742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kga03021
]
ST1E_0742
03019 Messenger RNA biogenesis [BR:
kga03019
]
ST1E_0742
Transcription machinery [BR:
kga03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ST1E_0742
Messenger RNA biogenesis [BR:
kga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ST1E_0742
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
DUF3086
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGF49106
UniProt:
M1LYF0
LinkDB
All DBs
Position
439302..440558
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AA seq
418 aa
AA seq
DB search
MHLNELKTLHVSQLLEIALSLEIDNANRLRKQELMFAIMKKRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYMSPSQIRRINLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVAPELLKHRIMFEDLTPLHPCQHMRLERDIKSEENLTGRILDVFSPIGKGQRGLIVASP
KSGKTIMMQHIAHAIASNFPDAVLIALLVDERPEEVTEMRRTVKGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVIILDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEIHLERRIAEKRVYPAINL
NKSGTRREELLIKPDILQKVWVLRKFIHDMDEIESMEFILDKMRNTKNNNDFFEMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaaacgaactaaagacgctacatgtttcacaattgctagaaatagctttgagc
ttagaaatagataatgctaaccgcttacgcaaacaggaattaatgtttgcaataatgaaa
aaacgagcaaaacaaggagaacaaatttttggtgatggtgtactagaagtcttgccagat
ggatttggatttctgagatcacctgaaacatcttatctagctagcactgatgatatatac
atgtctccatctcaaataagaagaataaatctacatacaggagattcaatagaaggagaa
gttcgtacaccaaaagatggagagagatactttgcattagtgaaagttgataaagtaaat
ggcgtggctcctgaattacttaaacatagaatcatgtttgaggatttgacccctctacat
ccttgccaacatatgcgcctagagagagatattaaaagcgaagaaaacctcactggtagg
atactagatgtattttctccaataggtaaaggacagagaggtttaatagttgcaagtcca
aaatcaggaaaaactataatgatgcaacatatagctcacgctattgcatctaatttccca
gatgctgtgttaatagcattattagtggacgaaagacctgaagaagtcacggaaatgaga
cgtactgttaagggagaagtagtagcctcaacatttgatgagccagcgacaagacatgta
caagttgctgaaatggtcatagaaaaagcaaaaagattagtcgaaatgaagaaagatgta
gttattattcttgactctataacaagattagcaagggcatataacactgttgttccatct
tctgggaaagttttaactggaggtgtagatgccaatgccttgcaacgtcctaaaagattt
tttggagctgctagaaatatagaagaaggaggatcacttactattttgggaactgctctt
atagaaacaggtagtagaatggatgaagttatctacgaggaatttaaaggaacaggtaat
tcggaaatacatttagaaagacgtatagcagaaaaacgtgtatatcctgctataaattta
aataaatcaggaacgagaagagaagaattattaattaaacctgatattttacaaaaagtt
tgggttttaagaaaatttattcatgatatggatgaaatagaatctatggagtttatactc
gataaaatgcgtaatacaaagaataataacgacttttttgaaatgatgaaaaagtaa
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