Candidatus Kinetoplastidibacterium galati: ST1E_0938
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Entry
ST1E_0938 CDS
T02466
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
kga
Candidatus Kinetoplastidibacterium galati
Pathway
kga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ST1E_0938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kga03400
]
ST1E_0938
Enzymes [BR:
kga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ST1E_0938
DNA repair and recombination proteins [BR:
kga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ST1E_0938
RecFOR pathway proteins
ST1E_0938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
nSTAND3
Mg_chelatase
AAA_16
AAA_22
AAA_14
RNA_helicase
Rad17
TIP49
AAA_3
Bac_DnaA
ABC_tran
AAA_17
AAA_33
Sigma54_activ_2
AAA_25
AAA_28
NB-ARC
TniB
IstB_IS21
TsaE
NACHT
NPHP3_N
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AGF49244
UniProt:
M1M204
LinkDB
All DBs
Position
598352..599413
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AA seq
353 aa
AA seq
DB search
MAIKPDYLAHTTKTHSKILEPTAPSGEESIERALRPKNFYEYIGQRRTCDQLEIFIKAAR
NRKESLDHTLLFGPPGLGKTTLAHIIAHEMGATLRQTSGPVLERPGDLAAILTNMEKNDV
LFIDEIHRLSSVVEEILYPALEDFQIDILIGEGPSARSVKLDLQPFTLIGATTRAGMLTN
PLRDRFGIVSRLEFYTPEDLSSIISRSAKLLKTNVTMEGSEEIARRSRGTPRIANRLLRR
VRDYAEVKAEGIINNVVASQALSMLEVDPNGLDLMDRKLLEAIVYKFDGGPVGIDSIAAS
IGEEKDTIEDVIEPYLIQHGYIQRTPRGRIATSITWNHLGLHQLNPSQQKNIF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcaattaagcccgactatcttgctcatactactaaaacgcacagtaaaatactggag
cccacagcgcctagtggcgaagaatctattgagcgcgcactaagaccaaaaaatttctat
gaatatattggtcaaagaagaacttgcgatcaattggaaatatttataaaagctgctcgc
aatagaaaagaatcattggatcacacattattatttggaccgcctggattagggaaaact
acccttgcgcatataatagcacatgagatgggagctacgctaaggcagacttctggtcct
gtgttggaaagaccaggagacctagcagcaatactaacaaacatggagaagaatgatgtt
ttatttattgatgaaatacataggctatcttcagttgtagaagaaattctttatcctgct
ttagaagactttcaaatagatattctaataggtgaaggaccatctgcaagaagtgttaaa
ttagatcttcaaccatttacattaataggagctaccactagagcaggcatgctaacaaat
cctctgagagatagattcggaattgtatcaagacttgagttttatactccagaagatctt
tctagtattatttctagaagtgctaagttattgaaaacaaatgttaccatggaggggtcg
gaagaaattgctcgaagatcacgaggtacaccaagaatagcaaatagactgttaaggcgt
gtacgtgattatgctgaagttaaagcagaaggtattataaataatgttgtggcaagccag
gctttatcaatgttagaagttgatccaaatggactagatcttatggatagaaaactattg
gaagctatcgtttataaatttgacggaggacctgtcggaattgacagtattgcagcatct
ataggagaagaaaaagatactatagaagatgtcatagaaccttatctaatacaacatgga
tatatacaaagaacaccacgtggcaggatagcaacatccataacttggaatcatttagga
ctacatcagctaaacccttctcagcaaaaaaatatattttaa
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