Kangiella geojedonensis: TQ33_0086
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Entry
TQ33_0086 CDS
T03889
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kge
Kangiella geojedonensis
Pathway
kge03420
Nucleotide excision repair
kge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TQ33_0086
03430 Mismatch repair
TQ33_0086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kge03400
]
TQ33_0086
Enzymes [BR:
kge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TQ33_0086
DNA repair and recombination proteins [BR:
kge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TQ33_0086
MMR (mismatch excision repair)
Other MMR factors
TQ33_0086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DUF4391
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AKE51078
UniProt:
A0A0F6RAY3
LinkDB
All DBs
Position
80830..83004
Genome browser
AA seq
724 aa
AA seq
DB search
MDASSIIESLNDAQTEAVTAPNKALLVLAGAGSGKTRVLVHRIAWLVKVEQVSAHSILAV
TFTNKAAKEMLGRVEDMLAMPARGMWVGTFHSIAHRLLRAHYRDAGLPEGFQILDAQDQL
RVIKRVMKELNLDDNEWPPKQAQWFINAKKDDGLRPGNIQHHGDFFVSTMVKVYYAYEEA
CKTAGLVDFNELLLRAYELWANNPHLLKHYQERFQHILVDEFQDTNAIQYAWIRLLCHEG
NRITIVGDDDQSIYGWRGAKIENIQQFENDFPDCKISRLEQNYRSTSTILKAANAVISYN
SDRMGKSLWTEGNEGEPITIYSAFNEQEEARFIAARIEDWVQQGNSYNDIAILYRSNAQS
RILEDAMLNRNIPYRIYGGLRFFERAEIKDTMAYLRLMTNRDDDASFERVVNTPARGLGE
KSVDLIRAKAREDETSLWQAASKMVVDQLLPPRARTAMAGFLHLINELDSSTKEVDLWEQ
TEVVIEHSGLMDKVSKEKGEKAQARKENLQELVNATREFDPDEMIPEETPDMTPLMAFIA
HASLEAGDTQADEYQESVQMMTLHSAKGLEFPLVFIAGMEEKLFPHQMSLDEPGGLEEER
RLAYVGITRAMQQLYLTHAEKRRMWGRETYPSVSRFISEIPAELMTEVRLNTQVQRPVFQ
KQSPIKRKGPEGFHLGQLVQHPKFGKGIIINYEGEGPQASVQVNFEKEGLKKLMLAYAKL
EPSS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctcaagcataatcgaatcgttaaatgatgcacaaaccgaagccgtgactgca
ccgaacaaagctttgttggtgctagcaggcgctggctcggggaaaactcgcgtattggtc
catcgaattgcttggctggttaaggtggagcaagtttccgctcactcgattttagcggtg
acctttaccaataaagcggctaaagaaatgcttggtcgggttgaagatatgctggcaatg
ccggcgcgaggtatgtgggtcggaaccttccacagtattgcgcaccgcttattacgcgct
cactaccgagatgcgggcctgcccgagggcttccaaattttggacgcccaagatcagttg
cgcgtgattaagcgggtgatgaaagagttaaacctcgatgacaatgagtggccacctaag
caggcgcagtggttcattaacgccaaaaaggatgatggcttacgtcccggaaatattcag
catcatggtgacttttttgtgagcaccatggtcaaagtttattacgcttatgaagaagcc
tgtaaaactgccggcttagtcgatttcaacgaattgttactacgtgcttatgagctatgg
gccaataatcctcatctattgaagcattaccaagagcgtttccagcacattctagttgac
gagttccaagatactaacgctattcagtacgcctggatccgcttgctgtgtcatgaagga
aaccgaattactattgttggcgatgacgatcagtcgatttacggctggcgtggtgcaaaa
attgagaatattcaacagtttgagaatgacttcccggactgtaagatttcccgcctagag
caaaactaccgttcaaccagcactatcctaaaagcggcgaacgcagtgatctcgtacaac
agtgatcgtatgggcaagagcttatggacagagggtaatgaaggcgagccgatcaccatt
tactcagcctttaatgagcaagaagaggcgcgctttatcgccgctagaatcgaggactgg
gtgcaacagggcaacagttataacgatattgccattctgtaccgcagtaatgctcaatcg
cggattctggaagacgccatgcttaaccgcaacattccttatcgtatttatggtggcttg
cgattcttcgagcgtgcagagattaaagataccatggcctatttgcggttaatgaccaac
cgtgatgatgatgcttcgtttgagcgtgtggtcaatacacccgctcgcggtttgggtgaa
aaatctgtggacttaattcgcgcaaaagcccgagaagacgagacatctttatggcaggcc
gcgagtaagatggtggtcgatcagctgttaccgccacgtgctcgcacagcgatggcaggt
ttcttgcacttaatcaatgagctggattctagcaccaaagaagtggatttgtgggagcaa
actgaagtggtcatcgagcactcaggcttaatggacaaagtgagcaaagagaagggtgaa
aaggcccaggcacgcaaggaaaacttgcaggagctggtcaacgcgactcgcgagtttgat
cccgatgagatgattcctgaagaaacgccggacatgacgccattgatggcctttatcgca
catgcgtcattagaggcaggcgatacgcaggccgatgaatatcaagagtcggtacagatg
atgacgttacactcagctaaggggttagaatttcctttggtgtttatcgctggcatggaa
gaaaaattattccctcatcaaatgtcgcttgatgaacccggtggtttagaggaagagcgt
cgcttggcttatgtgggcattacgcgtgctatgcagcagctgtatttaactcatgctgaa
aagcgccgtatgtgggggcgtgaaacttacccttcagtgtctcgctttatcagtgaaata
ccagctgagctaatgactgaggtgcggttaaatactcaggttcagcgaccggttttccaa
aaacagtcgccgattaagcgcaaagggccggaaggtttccatttggggcaactagtacag
caccctaaatttggaaaagggattattattaattatgagggagaagggccacaagcttcg
gttcaagtgaactttgaaaaagaaggcttaaaaaagctaatgttagcatatgctaaatta
gaaccttcttcataa
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