Kangiella geojedonensis: TQ33_0607
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Entry
TQ33_0607 CDS
T03889
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
kge
Kangiella geojedonensis
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kge01011
]
TQ33_0607
Enzymes [BR:
kge01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TQ33_0607
Peptidoglycan biosynthesis and degradation proteins [BR:
kge01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TQ33_0607
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM3_NFP
LysM_OapA
Usher
SLT_2
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
AKE51587
UniProt:
A0A0F6TPF4
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All DBs
Position
complement(653192..654733)
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AA seq
513 aa
AA seq
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MKRIAILSLLVLSACSSLQKKSDDDIADHKPSSQSEPLPTPDIAQDELSPEVELVTKDLT
PLPPVNLWEELSKKQSLTHITNSRVESHQKRFLSRTDHLVDRANKAAPYLHYIITELEKR
NMPVELAFTPMVESNFDPLAHSVVQAAGLWQFMPRTARGFGLTIDQWYDGRRDVVASTHA
ALDYYEYLNKMFDGDWLLTVAAYNVGQGNVLKAMKRNRRQGKATDYWSLKLPRETMRHVP
KWIALSNIFLNAKDFGVDLPFIENTPAFKEVSIEAPANLMELAKIANIDKNVFYRLNPAY
NKLFIPEEHGKANILVPTKNVQLFQKGIMDIEPGKALGLLTYTVKSGDNLSSIAKKHHTT
VSYLKNLNKLKSDFLKVGQVLKMPGFANASEHELNFMATLDKNRQRRRYQTYTVRSGDNL
WSIGKRFGVSSTQVARWNNINKNSTLRIGQRLKVWPKQYSQFASAKTSYKVKSGDSLSAI
ARKFKVKISDLTKWNRLNKRSIIRPGQTLTIYR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcattgccattttatcgctattggtactaagtgcctgtagcagcttacaaaaa
aagtctgacgacgatatagctgaccacaaaccatcgagtcaaagtgagccattaccaacg
cctgatattgctcaggatgagctatctcctgaggttgagttagtaacaaaagacttaacg
cctctaccacccgtgaatttatgggaagagttgtcgaagaaacagtcgttaacacacatc
actaactcgcgtgtagagtcgcatcaaaaacgttttttgagtcgtaccgaccacttagtt
gatcgcgccaacaaagcagcgccttatttacattacattatcaccgagcttgaaaagcgt
aatatgccagtcgagcttgctttcacaccaatggtggaaagtaacttcgatccgcttgcc
cactcagtcgtacaagcagcgggtttatggcagttcatgccgcgaaccgcacgagggttt
ggtttaacgatcgatcaatggtacgacggccgtcgtgatgtggttgcctcaactcatgcc
gcattggactattatgagtacttaaacaagatgtttgatggcgactggcttttaacagtg
gctgcctataatgtcggacaaggcaatgttttaaaagccatgaagcgtaaccgtcgccaa
ggtaaagccaccgactactggtcgctgaaactaccacgcgagacgatgcgtcatgtgcct
aaatggatcgctttatccaatattttcctcaacgcaaaggattttggtgtcgacttacct
ttcattgaaaatacaccagcgtttaaagaagtcagcatcgaagcccctgctaacttgatg
gagctcgctaaaattgcgaatattgataagaatgttttttatcgtctcaatcctgcttat
aacaaactgtttatcccagaagagcatggtaaagcgaatattcttgtgccaacaaaaaat
gtccagctgttccaaaaaggtatcatggacattgagcccggcaaagcactgggattatta
acttacacggttaaatctggcgataaccttagtagtatcgctaaaaagcatcacaccact
gtttcttacttgaaaaacctgaacaaactaaagtcagacttcctaaaagttggtcaagtt
ctaaaaatgcccggctttgccaatgcatccgagcacgaactaaacttcatggcaacgctt
gataaaaatcgtcagcgtcgtcgttaccagacgtacacagttcgcagtggcgataattta
tggagtatcggcaaacgctttggcgtcagctctacgcaagtcgctcgctggaataatatc
aacaaaaacagtaccttacgaatcgggcagcgtttaaaagtttggccaaagcagtactct
caatttgcttcagctaaaacctcttacaaggtgaaaagtggcgattctttatcggcaatc
gctcgcaagtttaaagtgaaaatcagcgacttaacgaagtggaaccgcctcaataagcga
agcattattcgcccaggacagaccctgaccatttatcgctaa
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