Kangiella geojedonensis: TQ33_1460
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Entry
TQ33_1460 CDS
T03889
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kge
Kangiella geojedonensis
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kge03016
]
TQ33_1460
Enzymes [BR:
kge01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
TQ33_1460
Transfer RNA biogenesis [BR:
kge03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TQ33_1460
Prokaryotic type
TQ33_1460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKE52408
UniProt:
A0A0F6RCH4
LinkDB
All DBs
Position
complement(1644517..1645584)
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AA seq
355 aa
AA seq
DB search
MISLTNETDISAIECYEWSRLHGKPLSTARFKSKMSDFVVEEHLRFELSGEGAHHFLYIE
KQNINTDIVVQKLMRFAEVKPTDIGYAGKKDRFAIARQWFSVQLPLLREINWSEFNDDEV
TVLDSRRHDKKLRIGAVKFNHFDIRLRDLDADKESFQKRLDNVISEGFPNYFGEQRFGRD
GANLTRGIDLLMKNKRLKNRNLQGLLFSAVRSFLYNHVVSERISKGLSATLLDGDFVMLS
GSEKGFVVEDLDAEQSRYTDNDILLTAPLAGSRPQPMNKALTFESDCLAKYQVLIEKLAN
KRFNEERRALLCFPQNVTSNWHNDTELTLSFDLPKGAFATSFLREIVSLVETKTP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgataagccttacaaacgaaacagacatctctgccattgagtgttacgaatggagccgc
ttacacggaaaaccattatcaactgctcgtttcaagtctaagatgagtgactttgtggta
gaagagcacttacgcttcgaactttcgggtgaaggtgctcatcatttcctgtatatcgaa
aagcaaaacattaataccgatatcgtggtgcaaaaactgatgcgctttgctgaggtgaaa
ccgacggatattggctatgccggcaaaaaagatcgttttgccattgcacgtcagtggttc
agcgtacaactgccgctattgagagaaatcaattggtccgagtttaatgatgatgaagta
acggttctagactctaggcgtcatgataaaaagctacgaattggtgctgttaagttcaac
cactttgatatcagactgcgcgatctcgacgcagacaaggagagttttcaaaagcgatta
gataacgtcatttcagagggttttcccaactatttcggtgaacaacgatttggcagagat
ggagctaacctcactcgaggtattgatttgctaatgaagaataaaaggctgaaaaaccgt
aacttacagggcttattgttctcggcagttcgttcattcttatataaccatgtggtatca
gagcgtattagcaaaggcttatctgctacattattggatggtgattttgtcatgcttagt
ggttcagaaaaaggctttgtggttgaagacttagacgctgagcagtcacgctatacggac
aatgacatcttgctaacagcgcctttagctggctcaagaccgcaacctatgaataaagcg
ctaacctttgagtccgattgcttggctaagtatcaggtcttgattgagaagttggctaat
aagcggtttaatgaggaacgaagagccttgctgtgttttcctcaaaatgtcacttcaaac
tggcataatgacactgagttaaccttatcttttgatttaccaaaaggtgcttttgcgacc
agctttttgcgagagattgtttcgctggttgagactaagacgccttaa
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