Kangiella geojedonensis: TQ33_1485
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Entry
TQ33_1485 CDS
T03889
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kge
Kangiella geojedonensis
Pathway
kge03410
Base excision repair
kge03430
Mismatch repair
kge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TQ33_1485
03430 Mismatch repair
TQ33_1485
03440 Homologous recombination
TQ33_1485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kge03400
]
TQ33_1485
DNA repair and recombination proteins [BR:
kge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TQ33_1485
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TQ33_1485
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TQ33_1485
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AKE52432
UniProt:
A0A0F6TR64
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All DBs
Position
complement(1673625..1675337)
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AA seq
570 aa
AA seq
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MPLNIRRRASNTEHALTDSSLLNRIYSNRGISSAEELDYQLSKLESFHSLTGIDSATELL
WQSLVGKEKVLIVGDFDADGATSSALAKLVLSRLGMTVDYLVPNRFDYGYGLSPELVEVA
KEMSPDLIITVDNGISSIAGVEAAKEAGIKVLVTDHHLAGDELPQADAIVNPNQPGDEFP
SKNLAGVGVVFYVLLAFRALLREKQWFDSSGVTEPNLAHYLDLVALGTVADVVPLDKNNR
ILVEHGLKLIRAMKCRPGILELLKVAKRDPSKIKSTDLGFAVGPRLNAAGRLDDMGLGIE
CLLSESKEKSIEYAQILHSLNTDRQQVEQEMQDEALAQIESMSFDNQEQSVSLCLYEPHW
HQGVVGLVASRLKERTYRPCIVFANADEAYIKGSGRSVKEVHIRDALALVDAKQPGLIDK
FGGHAMAAGLSLRKDKFEDFKRAFDDAVQQILGDSIMEDVVETDGALMPQEYQLASAELL
SSAGPFGQGFAEPAFDDVFKVLNQRIVGENHLKLTLEKEGCPKPISAIAFRVDPVQWSQP
VSNIRAVFRPDINDYYQKELQLIITHLEPV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccattaaacatccgtcgtagagcttctaatactgaacacgcacttaccgattctagt
ttactcaatagaatctactccaatcgcggtatttcaagtgctgaggaactcgattatcaa
ttatcaaagcttgagtcttttcatagccttaccggcattgattcagcgaccgagttgctg
tggcaaagcttagttggtaaggaaaaagttttaatcgttggtgattttgatgcagatgga
gccaccagcagtgctttagccaagctggtcttgtctcgcctaggcatgacggtggattac
ttggttcctaaccgttttgattatggttatggtttgtcgcccgagttggtcgaggtggca
aaagagatgtcgccagatttgattatcacagtcgataacggtatctccagtatagcggga
gtcgaagcggccaaagaggctggaataaaagtgttggtaacggatcaccatttagcgggt
gatgaactgccacaggccgatgctattgttaaccccaaccagcccggcgatgaatttccc
agcaaaaacttagcgggtgttggtgtggtgttttatgtgttactggcgtttcgtgcttta
ctgcgggaaaaacaatggtttgactcttctggtgttacagagcccaatctagctcattac
ttagatttagtcgccttaggtaccgttgcagacgttgtccctttagacaaaaataaccga
attttggttgaacatggattaaagcttattcgtgcaatgaagtgccgcccaggaatttta
gagttacttaaagtggctaagcgagatccgtcaaaaattaaatcgaccgatctgggtttt
gcggttggcccaagacttaatgctgctggacgtcttgatgatatgggattagggatcgaa
tgcttgctaagcgagtcgaaggaaaagtcgatagagtatgcacagattttgcatagtttg
aatacggacagacaacaggttgagcaagaaatgcaggatgaggctttggcccaaattgaa
tcgatgtcatttgataaccaagagcaatcagtctctttgtgtttgtatgaacctcactgg
catcaaggggtagtcgggttagtggcttcacgtttaaaagaaagaacctatcgcccctgt
attgtgtttgctaatgctgatgaagcgtacattaaaggttcagggcgttcggtaaaagaa
gttcacattagggatgctttggcgctggtagatgcgaagcaacccggacttattgataag
tttggcggtcacgccatggccgcaggcctttcattgcgcaaagataagtttgaagacttt
aagcgtgcttttgacgatgctgtacagcagattttaggcgatagtattatggaggatgtg
gtagaaacggatggagccttgatgccacaagagtatcaattagcaagcgctgagcttcta
tcgtcagcagggccctttggacaaggctttgctgagccagctttcgatgatgtgtttaaa
gtgttaaatcaacgaatcgttggggagaaccatttaaaactcactctagaaaaagaaggg
tgcccgaaacctatttcagcaattgctttcagagtcgatcctgttcagtggtcacagcca
gtatcgaatatacgagctgtgtttcgaccggatattaatgattattaccaaaaagagcta
cagctgattattactcacctagagcctgtgtag
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