Kangiella geojedonensis: TQ33_1577
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Entry
TQ33_1577 CDS
T03889
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kge
Kangiella geojedonensis
Pathway
kge03030
DNA replication
kge03430
Mismatch repair
kge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TQ33_1577
03430 Mismatch repair
TQ33_1577
03440 Homologous recombination
TQ33_1577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kge03032
]
TQ33_1577
03400 DNA repair and recombination proteins [BR:
kge03400
]
TQ33_1577
Enzymes [BR:
kge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TQ33_1577
DNA replication proteins [BR:
kge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TQ33_1577
DNA repair and recombination proteins [BR:
kge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TQ33_1577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
AKE52522
UniProt:
A0A0F6TR59
LinkDB
All DBs
Position
complement(1767432..1770917)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAPRFVHLKVHTEYSMVDSLVRVKPMLAECEKREVPAIAMTDQMNMCGLVKFYSTAVKSA
VKPIAGADLLIQDPDDEDSFFRVTALCMNTDGYLNLKYLISRAYLKNQHRGFPLVKKEWM
AELNQGIIILSGGREGDIGKAVLAGKMDLAAEYLGFWNHHFSNRFYLELHRTGRPYENEY
IHQVIGLAQGSGTPVVATNDVRFLQKEDFDAHEARVCINQGRVLADPRRPRDYSDQQYLR
TEDEMVELFDDIPEAIENTVEIAKRCNMDLRLGEYFLPEFPIPEGMTIDQYFEQVSKDGL
EERLDHLYDRNAENFAEIRKPYDERLQIELDVINSMGFPGYFLIVGDFIQWSKDNGVPVG
PGRGSGAGSLVAYAMKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVA
ERYGRNSVSQIITFGTMAAKAVIRDVGRVLSHPYGFVDKIAKLIPFEVGMTLEKAYEQEP
ELPRMYEEDEDFREVWDLARKLEGVKRNAGKHAGGVVIAPGDLEEFAPLYCDETGANVVT
QFDKDDVESAGLVKFDFLGLRTLTIIDWALETANGILQKKGEDPVDITRIDTEDPEVFKM
LQAANTTAVFQLESRGMKDLIKRLKPNRFEDIIALVALFRPGPLQSGMVDDFIRRKHGLD
KVSYPHPDYQHEWLKEILEPTYGIILYQEQVMQIAQVLAGYSLGGADILRRAMGKKKAEE
MEKQRSIFKEGAEKNGVDGDLAMKIFDLVEKFAGYGFNKSHSAAYALVAYQTAWLKTHHP
ASFMAAVMSSDMDNTDKVVTYVEDAEMQGITITPPDVNKGQYRFSVDEEGRIVYGIGAIK
GVGEGAIESLVNEREANGPYEDLFDFCSRVDLKKANRRVLESLIRAGALDELGPNRATLM
ASLDEAIKAAEQFNKSQEVGQDDLFGSVVATTASEQHQYVRVRPWTDEQVLQGEKDTLGL
YLTGHPIDRYVPEIRQMSVTRLRDLQPTGRGRTARVAGLIIAMRVMTTKRGDKMGILTID
DKSGRCDVTVYAETFERYRDVLTKDSVVVIDGEARHDDYSGGTSVSANSVLSFEQAREQY
CKKIVITVSDTVTGPDTMTELHEKLNQHKDGACPVVVNLQYQQAKLSADYKLSPEWAVQP
ADALVFALKHIPGCVEARVEY
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcgctttgttcatttaaaagttcataccgaatactctatggttgatagccta
gttagagttaagcctatgctggctgagtgtgaaaaacgagaagttccggctatagccatg
acggatcaaatgaacatgtgtggtctcgttaagttctactctaccgccgtgaagtcagca
gtgaagccgatagcaggcgctgacttactgatccaagaccctgacgatgaagatagtttt
tttcgtgtcacagctttgtgcatgaataccgacggctacctcaatcttaagtatttaatt
tccagagcctatttgaaaaaccaacaccggggctttccattagttaaaaaggaatggatg
gcggaactcaaccaaggaattatcattctttcggggggcagggaaggtgatattggtaaa
gccgtactggcaggcaagatggatcttgcagccgagtatttgggtttttggaaccatcac
ttttccaaccggttttacctagagcttcatagaactggtcgtccttatgagaatgaatac
attcatcaagtcatcggtttagcccaaggctccggtacgccagtcgtcgctactaacgac
gtaaggtttttgcagaaagaggatttcgatgcccatgaagctagagtgtgtattaaccaa
ggacgagtgttagccgaccctcgccgtccgcgtgattactctgaccagcaatatcttcgc
actgaagatgaaatggttgagctgttcgatgatatccccgaagctattgagaatacggtg
gaaattgctaagcgctgtaatatggatctgcgcttaggtgaatatttcttaccagaattc
cctattcctgagggaatgacgattgatcagtattttgagcaagtatcaaaagatggttta
gaagagcgacttgatcatctgtatgatcgcaatgctgaaaattttgctgaaatacgtaaa
ccgtacgacgaacgattacagattgagttagacgttattaattccatgggttttccgggt
tacttccttatcgttggtgacttcatccaatggtctaaggataacggtgtcccagttggt
ccaggccgtggttctggtgccggttcattagtggcttacgccatgaaaattaccgatctt
gatccgttggagtttgaccttcttttcgagagattcttgaatccagagcgtgtatcgatg
cctgactttgacgtcgacttctgtatggaagggcgagatcgggtcattgattatgttgca
gagcgctacggtcgtaacagcgtatcgcagattattactttcggtactatggcagcaaaa
gctgtaatacgtgatgtggggcgtgtattaagtcacccttatggcttcgtcgataagatt
gctaaactgattccctttgaagtgggtatgacgctcgaaaaagcttacgagcaagagcct
gagttacctcgaatgtacgaggaagacgaagactttcgtgaagtttgggatttggcccgc
aagctagaaggtgtgaaacgtaacgccggtaagcacgcaggtggtgtggtcattgcacca
ggagacttggaggaatttgccccgctttattgtgatgaaactggtgcgaatgtcgtgacc
cagttcgataaggatgatgttgaaagcgcgggtcttgtgaagtttgacttcttgggtttg
cgaacacttaccatcatcgattgggcgcttgaaactgccaacggcattttgcagaaaaaa
ggggaagatccggtcgatatcacacgcattgatacggaagatccggaagtgtttaaaatg
ctgcaagccgctaatactacagctgtcttccagctagagtcgcgtggtatgaaagacttg
attaagcgtcttaagccaaaccgttttgaagatattatcgctttggtggctttattccgc
ccgggacctttgcagtcaggcatggtcgatgactttattcgccgtaagcacggtttggat
aaggtgtcttacccacatcccgattatcaacatgaatggttaaaggaaatcttagagcca
acctacggcattattttgtaccaagagcaggtgatgcagatcgcacaggttttagcgggt
tactcgctaggtggcgctgatattttgcgtcgtgcgatgggtaagaaaaaagccgaggag
atggaaaagcagcggagtatctttaaagaaggcgcggagaagaatggcgttgatggtgat
ctcgccatgaagatctttgacttggtagaaaaattcgccggttatggttttaacaaatca
cactcggctgcttatgccttggtcgcttatcaaaccgcgtggttaaaaacgcatcaccca
gcatcctttatggcggcagtgatgtcgtcggatatggacaataccgataaggttgttaca
tatgtcgaagatgctgaaatgcagggtattaccattaccccgcctgacgttaacaaaggt
cagtatcgtttctcggtggatgaagaaggccgcatcgtttacggcatcggagcgattaaa
ggtgttggtgaaggcgcaatcgaaagccttgtcaatgaacgggaagctaacggcccttat
gaagatttattcgacttctgtagccgcgtggatctgaagaaagctaaccgccgagtgctt
gagtcattgattcgtgctggagccttggatgaacttggcccaaaccgtgcgactctaatg
gcatcgcttgatgaagcgattaaagcagccgagcagttcaataaaagccaggaagtgggg
caggatgatttatttggtagtgttgtcgcgaccactgccagcgaacagcatcaatacgtc
cgagtcagaccttggactgatgagcaagtattgcaaggcgagaaggacacattaggtctt
tatttaacggggcatccaattgatcgttacgtgcccgaaattagacagatgagtgtcact
cgcttgcgtgacttacaaccaacgggacgcggcagaaccgctcgtgtggctggattgatt
attgctatgcgcgtgatgacgaccaagcgtggcgataagatgggtattctaaccatcgac
gataagtcaggacgttgtgatgtcacggtttatgccgaaacgttcgagcgttatcgtgat
gtcctcaccaaagacagcgtggtggtgattgacggcgaagcacgtcatgacgattactct
ggtggtactagcgttagcgccaacagcgtcttatcctttgagcaggcgcgtgaacaatac
tgcaagaaaattgttattactgtctctgacaccgtgactggccctgataccatgacggaa
ctgcacgaaaagcttaatcagcataaagatggagcttgcccagttgtggttaacttacaa
taccaacaagcgaaattatccgcagactataaactgtctccagagtgggctgtgcagccc
gctgacgcactggtttttgccttgaagcatattccggggtgtgttgaggctagggtggag
tattag
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