Kangiella geojedonensis: TQ33_1856
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Entry
TQ33_1856 CDS
T03889
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
kge
Kangiella geojedonensis
Pathway
kge03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TQ33_1856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kge03019
]
TQ33_1856
03009 Ribosome biogenesis [BR:
kge03009
]
TQ33_1856
Messenger RNA biogenesis [BR:
kge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TQ33_1856
Ribosome biogenesis [BR:
kge03009
]
Eukaryotic type
Pre-60S particles
RNases
TQ33_1856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKE52792
UniProt:
A0A0F6TSF9
LinkDB
All DBs
Position
complement(2068098..2068655)
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AA seq
185 aa
AA seq
DB search
MAQNADNLIWLDLEMTGLDPETDKVIEIATIVTDKDLNILAEGPVLAIHQDDDTLANMNE
WCVEQHGKSGLTQRVKDSTVSEAEASRQTIEFLKQWVPEGKSPMCGNSICQDRRFMVKHM
PELERYFHYRHLDVSTLKELARRWKPGILPGFKKSATHLALDDIRESIAECAYYREHLID
LTESN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaaaacgcagataatttaatttggctggatctcgaaatgacgggattggatcct
gaaaccgataaagtgattgaaatcgccaccatcgtaaccgataaggatttgaacatattg
gccgaaggcccagtgttggccattcatcaggacgacgatacgctggctaacatgaatgag
tggtgcgttgagcaacatggtaagtcaggacttactcaacgtgttaaggatagcaccgtt
agtgaggccgaagcgtctcgccaaaccatcgagtttttgaaacagtgggtgccggaaggt
aagtcgccaatgtgtggtaactcgatctgccaagatcgccgctttatggtgaagcatatg
ccggaacttgaacgctattttcattaccgtcatttggacgtaagcaccttaaaggagctg
gcacgtcgctggaagccagggattctgccagggtttaaaaagagtgcgacgcatttagcg
ctggacgatattcgtgagtctattgctgaatgtgcctattatcgtgagcaccttattgat
ctgacggaatcgaattaa
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