KEGG   Kangiella geojedonensis: TQ33_1956
Entry
TQ33_1956         CDS       T03889                                 
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
kge  Kangiella geojedonensis
Pathway
kge03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kge00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TQ33_1956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kge03019]
    TQ33_1956
   03009 Ribosome biogenesis [BR:kge03009]
    TQ33_1956
Enzymes [BR:kge01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     TQ33_1956
Messenger RNA biogenesis [BR:kge03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TQ33_1956
Ribosome biogenesis [BR:kge03009]
 Prokaryotic type
  rRNA helicases
   TQ33_1956
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_30 CMS1 AAA_19 HEM4
Other DBs
NCBI-ProteinID: AKE52890
UniProt: A0A0F6TS10
LinkDB
Position
2157864..2159651
AA seq 595 aa
MTSKDSTTSFDQLELAPAVLKAIQEVGYEQPSPIQQASIPVLLTGRDIIGQAQTGTGKTA
AFALPLLSRIDPKDRTTQVLVLAPTRELALQVAEACQTYAKHMEQFTILPIYGGQRYDTQ
LRQLKRGAQVVVGTPGRVMDHIRRGTLKLDSLKALVLDEADEMLRMGFIDDVEWILGHTP
DQRQIALFSATMPNQIKKVAQKYLSNPEHIKIETKTSTAKTISQRYWFVSGLHKLDALTR
ILETETFDGMIIFVRTKTATMELAEKLNARGFRADALNGDIPQNTREKIVDKLKRGKIDV
LLATDVAARGLDVERISHVINYDIPYDTESYVHRIGRTGRAGREGHAILFVSHREKRMLK
AIERATNQPIEEMHMPTIDAINETRVERFATTITETLASQDLQFYTDLVEKYVKDNDQDW
PQLAAALAKMAAGDELLLKERPRKERESRDRDDRRDDRRDRKRDRNSKDRPRRENTFSAQ
AQPLADHPDVEMERYRIELGRNHDVKVGSIVGAIANEADIDSEYIGRIDLFDEFTTVDLP
AGMPKEVQSILAKARVAGKPMQLAPIGKQEGGKGKPKAKDKDKGKPKAKKRKPKS
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgacatctaaagattctacaaccagttttgatcaactggaactcgcgcctgcggtattg
aaagctattcaagaagtcggttacgagcaaccatctccaattcaacaagccagtatcccc
gtccttttaactgggcgagacattattggtcaagcacaaaccggtactggtaaaacggca
gcttttgctttgcctctcttatccagaattgatccaaaagacagaactactcaagttttg
gtattggcacctactcgtgagcttgcactgcaagttgccgaagcctgccaaacttatgct
aagcacatggaacagttcactattctgccaatttacggcggtcaacgttatgacacccag
cttcgtcaacttaaacgtggcgctcaggttgtagtcggaacgcctggccgagtcatggat
catattcgacgtggcacccttaagcttgattccttaaaagctttagtacttgatgaagcc
gatgaaatgttgcgcatgggattcattgacgacgttgaatggattttgggacatactccc
gatcagcgtcaaattgcgttgttctctgcgaccatgccaaaccaaattaagaaggttgct
caaaaatacttgagcaatcctgagcacattaaaattgaaaccaaaacatcaacggcgaaa
accattagtcagagatactggttcgttagtggactacacaagctagacgctttaacccga
attctcgaaactgaaactttcgacggcatgattatctttgtacgcactaaaacggcgacc
atggaattagccgagaagttgaatgctcgaggtttcagagctgatgcactcaatggcgat
attccgcaaaacacccgtgagaaaattgtcgataaactaaagcgcggaaaaattgatgtt
ctgttagccacagacgtcgcggctcgtggacttgatgtagaacgtattagtcacgttatc
aactatgacattccttacgacacagaatcttacgtacaccgtattggtcgtacaggtcgt
gcggggcgtgaaggtcatgctattttgtttgtctctcaccgcgagaaacgcatgttgaaa
gctattgagcgtgcgacaaaccaaccaatcgaagaaatgcatatgccaactatcgacgcg
attaatgaaactcgtgtcgaacgtttcgctactaccattacagaaactttggcaagccaa
gacttacaattctatacagatttagtcgaaaaatatgtcaaagacaatgaccaagactgg
ccacagcttgccgccgcattagcgaaaatggctgctggtgacgagttactattaaaagaa
cgacctcgcaaagaacgtgagagtcgtgatcgtgacgaccgtcgcgatgaccgcagagat
cgcaaacgcgatcgtaatagcaaagatcgtccacgtcgcgaaaatactttttctgcacaa
gcgcaaccattggccgatcatcctgatgtcgaaatggagcgttaccgtattgagctaggt
cgaaaccacgatgtgaaagttggtagcattgttggtgctattgccaatgaagccgatatc
gacagtgaatacatcggacgaatcgacttatttgacgaattcacaacggttgatcttcca
gcaggtatgccaaaagaagttcaatctattctcgctaaagcacgcgttgcgggtaagcca
atgcaactcgcaccaattggtaagcaggaaggtggaaaaggtaaacctaaggcaaaggac
aaagacaagggtaagccgaaagccaaaaaacgcaaaccaaagtcttaa

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