Kangiella geojedonensis: TQ33_2088
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Entry
TQ33_2088 CDS
T03889
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kge
Kangiella geojedonensis
Pathway
kge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TQ33_2088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kge03019
]
TQ33_2088
03110 Chaperones and folding catalysts [BR:
kge03110
]
TQ33_2088
03029 Mitochondrial biogenesis [BR:
kge03029
]
TQ33_2088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kge04147
]
TQ33_2088
Enzymes [BR:
kge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TQ33_2088
Messenger RNA biogenesis [BR:
kge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TQ33_2088
Chaperones and folding catalysts [BR:
kge03110
]
Heat shock proteins
HSP60 / Chaperonin
TQ33_2088
Mitochondrial biogenesis [BR:
kge03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TQ33_2088
Exosome [BR:
kge04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TQ33_2088
Exosomal proteins of other body fluids (saliva and urine)
TQ33_2088
Exosomal proteins of breast cancer cells
TQ33_2088
Exosomal proteins of colorectal cancer cells
TQ33_2088
Exosomal proteins of bladder cancer cells
TQ33_2088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKE53017
UniProt:
A0A0F6TSR6
LinkDB
All DBs
Position
complement(2298904..2300547)
Genome browser
AA seq
547 aa
AA seq
DB search
MAKDVRFGDEARKGMLKGVNTLANAVRVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIE
LEDKFENMGAQMVKEVASQTNDIAGDGTTTATVLAQSIVNEGLKSVAAGMNPMDLKRGID
KAVIAAVEELKNIAVPCEDQKAISQVGTISANSDENVGKIIAEAMEKVGKEGVITVEEGS
GLNNELDVVEGMQFDRGYLSPYFVTDTESMVADLENPFLLLVDKKISNIRELLPTLEAVA
KSSRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLEDIAILTGATVI
SEDLGMSLENTELAQLGEAKRVQISKDNTTVIDGAGDKTQIEGRVKQIRAQIEETSSDYD
KEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGTALVR
VLSRLGELRGDNEEQNVGIKIALRAMESPLRQIVANAGAEPAVVVAKVKEGEGNFGYNAA
TGEFGDVMEMGILDPAKVTRSALQNAASIAALMITTEAMVTDLPKKDEPAAPDMGGMGGM
GGMPGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacgtacgttttggagatgaagcacgtaaaggcatgctaaaaggtgtaaac
acgcttgcgaatgctgttcgtgtcacgctaggacctaaaggtcgtaacgtagtgttagac
aaatcatttggcgcgccaactatcactaaagatggtgtttctgtggcgaaagaaatcgaa
ctagaagataagttcgaaaacatgggcgcgcagatggttaaagaagttgcatcacaaacc
aacgatatcgctggtgatggtacaacaacagcaaccgtattggcgcaatctatcgtcaat
gaaggcttgaaatcagttgctgctggcatgaacccaatggatctgaagcgcggtatcgac
aaagcggttatcgctgcggtagaagagctgaaaaacattgcagttccatgtgaagatcaa
aaagcgatctcgcaagtaggcacaatctctgctaactctgatgagaatgttggtaagatc
attgctgaagcgatggaaaaagtaggtaaagaaggcgttatcacggttgaagaaggttct
ggtcttaacaacgaactagacgttgttgaaggtatgcaattcgatcgaggttacctttct
ccatacttcgtcacagacacagaaagcatggttgccgatcttgaaaacccattcttgtta
ttggtggataaaaagatctcaaacatccgtgagttgcttccaacattagaagctgtagct
aaatcaagccgtccgctattaatcgtagctgaagacgttgaaggcgaagcgctagcgact
ctagttgtgaacaacatgcgtggtatcgttaaagtggcagcagttaaagctcctggtttc
ggtgaccgtcgtaaagcaatgttagaagacatcgctatattaacgggcgcgacagtaatc
tcagaagatttaggcatgagcctagaaaacactgagttggcgcaactgggtgaagcgaag
cgtgtacaaatcagcaaagacaacacaactgtgattgatggtgctggtgataaaacgcaa
atcgaaggccgcgttaagcaaattcgtgcgcaaatcgaagaaacgtcttctgattatgac
aaagagaaacttcaagagcgtgttgctaaattagctggcggtgttgcggtcatcaaagtt
ggcgcagctactgaagttgaaatgaaagagaagaaagaccgtgttgacgatgcattgcac
gcaactcgcgcagccgtcgaagaaggcgttgttgccggtggtggtactgcattagtacgc
gtactgtcacgtctaggcgagcttcgtggtgacaacgaagagcagaacgttggtatcaaa
attgcactacgtgcgatggagtcaccattacgtcaaatcgttgccaacgcaggtgcagag
ccagcggtagttgttgcgaaagttaaagaaggcgaaggtaacttcggctataacgcagcg
acaggtgagtttggtgatgtgatggaaatgggtatccttgatccagcaaaagtaacgcgt
agcgcgctacaaaatgcagcatctatcgcagcattaatgatcactaccgaagcgatggtt
accgacctaccgaagaaagatgagcctgctgctccagatatgggcggtatgggtggtatg
ggtggcatgccaggtatgatgtaa
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