Klebsiella grimontii: JJJ10_06995
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Entry
JJJ10_06995 CDS
T07992
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kgr
Klebsiella grimontii
Brite
KEGG Orthology (KO) [BR:
kgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kgr03009
]
JJJ10_06995 (srmB)
Enzymes [BR:
kgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JJJ10_06995 (srmB)
Ribosome biogenesis [BR:
kgr03009
]
Prokaryotic type
rRNA helicases
JJJ10_06995 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QTP41443
LinkDB
All DBs
Position
complement(1443973..1445304)
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AA seq
443 aa
AA seq
DB search
MTVTTFSELELDENLLDALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPAEVSATPSTRERKKIHQWYYRADDIKHKTALLV
HLLKQPEATRSIVFVRKRERVHELAGWLREAGINTCWLEGEMVQAKRNEAISRLTDGRIN
VLVATDIAARGIDIADVSHVFNFDLPRTADIYLHRIGRTGRAGKKGTAISLVEAHDHLLL
GKIGRYIEEPLKARVIDELRPTTRAPSEKQTGKPSKKVLAKRAEKKEKEKEKPRVKKRHR
DTKNIGKRRKPSAADTPQQSNEE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaacctgctggacgcactccag
gataaaggtttcacacgcccgacagccattcaggccgccgctattccgcctgcgcttgat
ggccgtgatattctcggttcagccccgaccggcaccggtaaaacggcggcgtatctcctg
ccagcgttgcagcatctgctcgattttccgcgcaagaagtctggtccgccgcgcatcctt
atcctgacccccactcgcgaactggcgatgcaggttgccgaccatgcgcgtgaactggca
aaacatactcatctggatatcgccacgatcaccggcggtgtcgcctatatgaaccatgcc
gaagtgttcagcgagaaccaggacatcgtggtcgccacgaccggtcgcctgctgcaatat
attaaagaagaaaactttgattgccgcgccgttgaaacgctgatccttgatgaagctgac
cgcatgctggacatgggcttcgcgcaggatatcgaacatatcgccggtgaaacccgctgg
cgtaagcagaccatgctgttctccgccaccctcgaaggcgacgccattaaggattttgcc
gagcgtctgctggaagagccggcggaagtttcggcgaccccatccactcgcgaacgtaaa
aagatccatcagtggtattaccgcgcggatgacatcaagcataaaaccgccctcctcgtg
catcttctgaagcagccggaagcgacgcgttctatcgtcttcgtacgcaagcgcgagcgc
gtgcatgaactggcgggctggctgcgtgaagcgggtatcaatacctgctggctggaaggc
gagatggtacaggcgaaacgtaatgaagcgattagccgtctcaccgatggccgtattaat
gtattagtcgctaccgacattgccgcccgcggtatcgatatcgcggacgtgagtcacgta
ttcaatttcgacttgccgcgcacggcggatatctacctgcaccgtatcggtcgtaccggg
cgcgcgggtaaaaaaggaaccgccatttctctggttgaagcccacgaccacctgctgctg
ggtaaaattggccgctatattgaagagccgttaaaagctcgcgttatcgatgaactgcgc
ccgaccacccgcgcgcccagcgagaagcaaaccggtaaaccctccaagaaggttttagcg
aagcgagcagagaagaaagagaaagaaaaagagaagccgcgcgtcaaaaaacgccaccgc
gataccaaaaatattggcaagcgtcgtaaaccaagcgcagcggatacaccgcagcagtca
aacgaagagtaa
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