Klebsiella grimontii: JJJ10_15185
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Entry
JJJ10_15185 CDS
T07992
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kgr
Klebsiella grimontii
Brite
KEGG Orthology (KO) [BR:
kgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kgr03019
]
JJJ10_15185 (hrpA)
Enzymes [BR:
kgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JJJ10_15185 (hrpA)
Messenger RNA biogenesis [BR:
kgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JJJ10_15185 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
nSTAND3
T2SSE
NACHT
ResIII
AAA_16
PhoH
NTPase_1
AAA_23
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QTP37818
LinkDB
All DBs
Position
complement(3209238..3213140)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFSQLVTRLDGLMLRDKSRFAGRLHGVKKVKNPDAQQAILQEMAQEIEQAAGR
VLLREAARPAITYPENLPVSQKKQEILDAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKIIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEDADDTERDQLQAIFDAVDELGRESPGDILIFMSGE
REIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQAHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PAFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
QTAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPVNSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERGQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRNEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDKWWKQASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRRMTGVTIDREAW
QWEQVPDYLKITFRVVDDKNKKLHEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW
SFGRLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQEMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWSEEGFAALHEK
VRAELNETVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKSQMSGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESLQQRWQQWLNKLPPQRRQDDD
VQEIRWMIEELRVSLFAQQLGTPYPISDKRVLQAMEQIAA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaataaccttctctcagctcgttacacggcttgatggcctgatg
ctgcgcgataagtcgcgcttcgccggtcgcctgcacggcgtgaagaaggttaaaaatcct
gatgcccagcaggccatccttcaggagatggcgcaagaaattgaacaggcggcagggaga
gtcctgctgcgcgaagccgctcgaccggcgataacctacccggaaaacctgccggtcagc
cagaaaaagcaggagatcctcgacgccgtgcgcgaccaccaggtggtgattgtggcgggg
gagaccggctcgggcaaaaccacccaactgccgaaaatctgtatggagctgggacgcggc
gttaaagggttaatcggccatacgcagccgcgccgtctggccgcgcgtaccgtcgccaac
cgtattgccgaagagctacaaacggaaccgggcggctgcatcggctataaagtccgcttt
agcgatcacgtcagcgataacaccatggttaagctgatgaccgacggtattctgctggcg
gaaatccagcaggatcggctgctgatgcagtacgacaccattattatcgatgaagcgcac
gaacgcagcctcaacatcgacttcctgcttggctatttgcgggaactgctgccccgtcgc
ccggatctgaaaattattatcacctcggcgaccatcgacccggaacgcttctcgcgccac
tttaacaacgcgccgattatcgaagtgtccgggcgcacctacccggtagaagtgcgctat
cgacccatcgttgaagacgccgacgacaccgagcgcgatcagctgcaggcgatatttgac
gccgttgatgagctcgggcgcgaaagccccggcgatatccttatttttatgagcggcgag
cgcgaaatccgcgataccgccgatgcgctcaataagctgaatctgcgccataccgaagtg
ctgccgctgtacgcgcggttgtccaacagtgagcagaaccgcgtgttccaggcccacagc
gggcggcggatcgtgctggccaccaacgtcgcggaaacctcgctgaccgtgccgggcatc
aagtacgttatcgatcccggtaccgcgcgtatcagccgctatagcttccggactaaagta
cagcgcctgcctattgagcctgtttcccaggcgtcggctaaccagcgtaagggccgctgc
ggccgcgtctccgaagggatctgtattcgtctctattcggaagacgacttcctgtcgcgc
ccggcgtttaccgacccggaaattctgcgcaccaacctggcgtcggttattctgcaaatg
accgcgctgggcctgggcgatattgccgcgttcccgtttgttgaagcgccggataagcgc
aatattcaggacggcgtacgcctgctggaggaactgggggcgattaccaccgacgaacag
cagaccgcctataagctgacgccgatgggccgccagctcagccagctaccggttgacccg
cgtctggcgcggatggtactggaggcgcaaaaacacggctgcgtgcgcgaggcgatgatc
atcacctcggcgctctcgattcaggatccgcgcgagcggccgatggacaagcagcaggcc
tctgacgagaagcatcgtcgtttccacgataaagagtccgacttccttgcctttgtgaat
ttgtggaactaccttggcgagcagcaaaaagcgctctcctcgaaccagttccgccgccag
tgccgggtcgattttctcaactacctgcgcgtgcgcgagtggcaggatatctacactcag
ctgcgtcaggtggtcaaagagctcggcctgccggtgaacagcgagccggcggagtatcgc
gaaattcacaccgcgctgctgaccggcctgctgtcgcacatcggtatgaaagacgccgac
aagcaggagtttaccggcgcgcgtaacgctcgcttctccatcttccccggctccgggttg
ttcaaaaagccgccgaaatggacgatggtcgccgaactggtggaaaccagccgcctgtgg
gggcgcatcgccgcgcgcattgagccggagtgggtcgagccggtggcgcagcatctgatc
aaacgctcgtacagcgaaccccactgggagcgcgggcagggcgcggtgatggcgacggag
aaggtgaccgtttacggcctgccgattgtcgcggcccgcaaggtcaactacagccagatt
gacccggcgctgtgccgcgaactgtttatccgccacgcgctggtggagggcgactggcag
actcgccacgccttcttccgcgaaaacctcaagctgcgtaacgagattgaagagctggag
cataaatcgcgccgccgcgacattctcgtcgatgacgaaacgctgtttgagttctacgac
cagcgcatcagccatgacgtcatctccgcgcgccacttcgataaatggtggaagcaggcc
agccgcgagacgccggatctgctcaactttgaaaagagcatgctgattaaggaaggcgcg
gagcaggtcagcaagctcgactatccgaacttctggcaccagggcaacctgaagctgcgt
ctcacctatcagtttgaaccgggcgccgacgccgacggcgtaacggtgcatattccgctg
ccgctgctcaaccaggtggaagaagccggatttgagtggcagatcccggggctgcgccgt
gagctaattatcgccctgattaaatcgctgccgaagccggtacggcgtaacttcgttcct
gcgccgaactacgcggaggcgtttttaggccgcgcgacgccgctggagctgccgctgctg
gattctctggagcgcgaactgcggcggatgaccggcgtgactatcgaccgcgaggcctgg
cagtgggagcaggtgcccgattacctgaaaatcactttccgggtggtggacgacaaaaac
aagaagctacatgaagggcgctcgctgcaggatctgaaagatgccctgaaaggcaaggta
caggagacgctgtccgcggtcgccgatgacggtatcgagcagagcgggctgcatatctgg
agctttggccggctaccggagagctacgagcagaagcgcggcaactataaagttaaggcc
tggccggcgctggtggacgaacgcgacagcgtggcgatcaagctgtttgataatccgctc
gagcagcagcaggagatgtggcgcggcctgcgccgcctgctgctgctgaatatcccgtcg
ccgattaaatacctgcacgagaagctgccgaataaagccaagctggggctctatttcaac
ccctacggcaaagtgctggatctgatcgatgactgtatctcctgcggcgtggataagctg
attgacgaagcgggcgggccggtatggagcgaagagggctttgccgcgctgcatgaaaag
gtgcgcgctgaactcaacgagacggtggtggaaatcgccaaacaggttgagcagatcctg
accgcggtgtttaacatcaataaacgcctgaaaggccgcgtggatatgaccatggcgctg
gggctgtcggatatcaaatcgcagatgagcggtctggtgtatcgcggcttcgtcaccggc
aacggcttccgccgcctgggtgatacgctgcgctatctgcaggcgattgaaaagcggctg
gagaaaatggcgatcgatccgcaccgcgatcgcgcgcagatgctcaaagtggagagcctc
cagcagaggtggcagcagtggttgaataagctaccacctcagcgccgtcaggatgacgat
gtgcaggagatccgctggatgattgaagagctgcgcgtcagcctgttcgcccagcagctc
ggcacgccgtatccgatttccgacaagcgggtgctgcaggcgatggagcagatcgcggcc
taa
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