Klebsiella grimontii: JJJ10_19060
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Entry
JJJ10_19060 CDS
T07992
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kgr
Klebsiella grimontii
Pathway
kgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JJJ10_19060 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kgr03019
]
JJJ10_19060 (rhlE)
Enzymes [BR:
kgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JJJ10_19060 (rhlE)
Messenger RNA biogenesis [BR:
kgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JJJ10_19060 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTP38541
LinkDB
All DBs
Position
complement(4047221..4048573)
Genome browser
AA seq
450 aa
AA seq
DB search
MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM
KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIALAGYEPDPSIKAEPIQNGRQQQRGGGGRGGQSQGRGGQGQGRGQQSAP
RRTDGEAPKARIQDGKPPRRRRPRKPVAAE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcctgaaatcctgcgcgccgtcgctgagcagggc
tacgttgagccaacccctattcagcagcaggccatcccggcggtattacagggtcgcgat
ctgatggccagcgcccagaccggtactggtaaaacggcgggatttacgctgccgctgctt
cagcatctggtccagaaagaaccgcacgctaaaggccgtcgtccggtgcgcgcgctgatc
ctgacccccacgcgcgagctggcggcgcagattggcgagaacgtgcgggattacagcaaa
taccttaacgttcgttcgctggtggtgttcggcggcgtgagcattaacccgcagatgatg
aagctgcgcagcggcgtcgatatcctggtggcaacgcccggccgcctgctggatcttgaa
catcagaacgccgtgagcctggacaaagttgaagtgctggtgctggatgaagccgaccgt
atgctggatatgggctttattcacgatattcgccgggtactggcgaagctgccggcaaag
cgccagaacctgctgttctccgcaaccttctccgacgagattaaatcgctggcggaaaag
ctgctgcataatccgctggaaattgaagtcgctcgccgcaacaccgcttcagaacaggtg
agccagctggtgcattttgtcgacaaaaagcgcaagcgcgagctgctgtcgcagatgatc
ggcgaaggcaactggcagcaggtgctggtctttactcgcaccaagcacggcgctaaccat
ctggcggagcagcttaataaagacggcatccgcagcgccgccattcacggcaacaagagc
cagggcgcgcgtacccgcgcgttggctgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcgcgcggtctggacattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtaccggaagactatgtgcaccgtattggtcgtaccgggcgcgccgcg
gcaacgggtgaagcgctgtcgctggtctgcgtggatgaacataagctgctgcatgatatc
gaacgcttgctgaaaaaagagatcccgcgtatcgcccttgcgggctatgagccggatccg
tcgatcaaagccgagccgattcagaacggtcgtcagcagcagcgcggaggcggcggccgt
ggtggtcaaagccagggccgcggcggtcagggacaaggtcgcggtcagcagtccgcgccg
cgtcgtaccgatggcgaagcgccgaaagcgcgaattcaggacggtaaacctcctcgccgt
cgtcgcccgcgcaaacccgtggcggctgagtaa
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