Klebsiella grimontii: JJJ10_26335
Help
Entry
JJJ10_26335 CDS
T07992
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kgr
Klebsiella grimontii
Pathway
kgr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JJJ10_26335 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kgr03021
]
JJJ10_26335 (rpoC)
03400 DNA repair and recombination proteins [BR:
kgr03400
]
JJJ10_26335 (rpoC)
Enzymes [BR:
kgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JJJ10_26335 (rpoC)
Transcription machinery [BR:
kgr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JJJ10_26335 (rpoC)
DNA repair and recombination proteins [BR:
kgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JJJ10_26335 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EAD9
Motif
Other DBs
NCBI-ProteinID:
QTP39882
LinkDB
All DBs
Position
complement(5602369..5606592)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRNGEEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRL
SNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIESAGSSDFLEGEQVEYSRVKIANRDLEANGKVGATFARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVSVEEASANLAELLNAGLGGSDND
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcatcgccagacatgatccgttcatggtcttttggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaacctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagattacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatctgtgagaagtgcggcgttgaagtgacccagactaaagtgcgccgtgag
cgtatgggccacatcgagctggcgtctccgaccgcccacatctggttcctgaagtctctg
ccgtcccgtatcggcctgctgctcgatatgccgctgcgcgatatcgaacgcgtgctgtac
ttcgaatcctatgtggttatcgaaggtggtatgaccaacctggaacgccagcagatcctg
actgaagagcagtatctggatgcgctggaagagttcggtgacgaatttgacgcgaagatg
ggtgcggaagctatccaggccctgctgaagagcatggatctggagcaagagtgtgaaact
ctgcgcgaagagctgaacgaaaccaactccgaaaccaagcgtaagaagctgaccaagcgt
atcaaactgctggaagcgttcgtccagtctggcaacaagccggagtggatgatcctgacc
gttctgccggtactgccgccagatctgcgtccgctggttccgctggatggcggtcgtttt
gcgacttctgacctgaacgatctgtatcgtcgcgtcattaaccgtaacaaccgtctgaaa
cgtctgctggatctggccgcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aagcgtcctctgaaatctttggccgatatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctcggtaagcgcgttgactactccggtcgttcggttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcgctggagctgttcaaaccgttc
atctacggcaagctggagctgcgtggcctcgccaccaccatcaaagccgcgaagaaaatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccaactctgcaccgtctgggtatccaggcatttgagccggta
ctgatcgaaggtaaagctattcagcttcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctcgaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtccccggcgaacggcgaacctatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttaccgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcaccgaatacgaaaaagatgaaaac
ggcgagttcgttgcgaaaaccagcctgaaagatacgaccgttggtcgtgccattctgtgg
atgatcgtaccgaaaggtctgcctttctccatcgtcaaccaggcgctgggtaagaaagcc
atctccaagatgctgaacacctgctaccgtattctgggcctgaaaccgaccgttattttt
gcggatcagacgatgtacaccggctttgcttatgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggagaaaaaatacgagatcatcagcgaagcggaagcagaa
gttgctgagattcaggagcagttccagtctggtctggtgaccgcgggcgaacgctacaac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggacaac
ctgcaaactgaaaccgttattaaccgtaacggcgaagaagagcagcaggtctccttcaac
agcatctacatgatggccgactccggtgcgcgtggctctgctgcacagattcgtcagctt
gccggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaacggcgaactccggttacctgactcgtcgtctg
gttgacgtcgcgcaggacctggtcgtcactgaagatgactgcggcaccctggaaggcatc
accatgaccccggttatcgagggtggcgatgttaaagagccgctgcgcgatcgcgttctg
ggtcgtgtgactgctgaagacgttctgaagccgggtacggcggacattctggttccacgc
aacacgctgctgcacgagcactggtgcgatctgctggaagagaactccgttgactccgtc
aaggtacgttccgttgtatcctgcgacaccgactttggtgtatgtgcgcactgctacggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaggctatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgagtccagcatccaggtgaaaaacaaaggtagcatccgtctg
agcaatgcgaagtcggttgtgaactccagcggtaagctggttattacctcccgtaatacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggc
tccgttatggcgaaaggtgatggcgagcaggttgccggcggtgaaaccgtagcaaactgg
gatccgcacaccatgccggttatcacggaagtgagtggtttcgtccgcttcactgacatg
attgacggccagaccattactcgtcagaccgacgagctgaccggtctctcttctctggtg
gttctggattctgcagagcgtaccactggcggtaaagacctgcgtccggcgctgaaaatc
gttgatgctcagggcaatgacgttctgatccctggcaccgatatgcctgcgcagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcgtacagatcagctctggtgacacc
ctggcgcgtgtaccgcaggaatctggcggtaccaaggacatcaccggtggtctgccgcgc
gttgcggatctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagc
ggcatcatttccttcggtaaagaaaccaaagggaaacgtcgtctggttatcaccccggta
gacggtagcgatccgtacgaagagatgattcctaagtggcgtcagctcaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccggaagcgccgcacgacatt
ctgcgtctgcgtggcgtgcatgctgtgacgcgttacattgttaacgaagttcaggacgta
taccgtttgcagggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagcgaccatcgaaagcgccggtagctccgacttcctggaaggcgaacaggtt
gaatactctcgcgttaagattgcaaaccgcgatctggaagcgaatggcaaagtgggggca
acattcgcccgcgatctgctgggtatcaccaaagcgtctctggcaaccgaatcgttcatc
tctgccgcatcgttccaggagaccacgcgtgtcctgaccgaagcagccgtagcgggtaaa
cgcgacgaactgcgtggcctgaaagagaacgttatcgtgggtcgtttgatcccggccggt
accggttatgcgtatcaccaggatcgtatgcgccgtcgcgcagcgggcgagctgccagca
gcgccgcaggtcagcgtggaagaagcttctgccaacctggcagaactgctgaacgccggt
ctgggcggatctgacaacgattaa
DBGET
integrated database retrieval system
